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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:130.8 nTPM
HPA:130.8 nTPM
GTEx:152.6 nTPM
FANTOM5:97.8 Scaled Tags Per Million
Pig:31.4 nTPM
Mouse:180.0 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB003692
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 130.8
Sample id Sample description nTPM
Hippocampus
nTPM: 124.6
1898 Male, age 80, left hemisphere 135.2
2148 Female, age 91, left hemisphere 132.6
2621 Female, age 67, right hemisphere 129.8
2529 Female, age 94, left hemisphere 123.0
1855 Male, age 76, left hemisphere 118.5
1911 Female, age 85, right hemisphere 108.4
Dentate gyrus
nTPM: 126.8
2530 Female, age 94, left hemisphere 145.2
1927 Female, age 91, both hemispheres 129.2
2531 Female, age 67, both hemispheres 127.6
2010 Male, age 76, both hemispheres 124.7
2246 Female, age 85, both hemispheres 119.7
2528 Male, age 74, both hemispheres 114.1
Entorhinal gyrus
nTPM: 124.9
2764 Male, age 80, right hemisphere 131.7
1787 Male, age 76, left hemisphere 129.7
2613 Female, age 94, left hemisphere 128.4
1938 Female, age 85, left hemisphere 124.6
2686 Male, age 75, right hemisphere 118.5
2117 Female, age 91, right hemisphere 116.1
Hippocampus, CA1
nTPM: 124.5
2749 Male, age 80, left hemisphere 145.3
2045 Male, age 76, both hemispheres 126.8
1873 Female, age 85, both hemispheres 122.2
2527 Male, age 74, both hemispheres 120.6
2082 Female, age 91, right hemisphere 107.8
Hippocampus, CA2
nTPM: 121.3
1963 Male, age 80, left hemisphere 135.8
1892 Male, age 76, both hemispheres 132.2
2437 Female, age 94, left hemisphere 123.5
1940 Female, age 85, left hemisphere 114.2
2249 Male, age 74, both hemispheres 113.9
2113 Female, age 91, right hemisphere 108.3
Hippocampus, CA3
nTPM: 126.5
2620 Female, age 94, left hemisphere 141.3
2861 Female, age 67, both hemispheres 134.2
2436 Male, age 74, both hemispheres 126.6
2137 Male, age 80, left hemisphere 125.2
1867 Male, age 76, both hemispheres 122.5
1891 Female, age 85, both hemispheres 109.4
Parahippocampal cortex
nTPM: 122.2
2245 Female, age 91, both hemispheres 136.9
2250 Female, age 67, right hemisphere 128.4
2532 Female, age 72, left hemisphere 125.1
1990 Female, age 91, right hemisphere 124.9
1850 Male, age 80, both hemispheres 123.4
2622 Female, age 67, right hemisphere 122.1
1933 Female, age 85, both hemispheres 121.8
2018 Male, age 76, both hemispheres 116.3
2693 Female, age 94, both hemispheres 113.0
2692 Male, age 74, both hemispheres 110.6
Perirhinal gyrus
nTPM: 130.8
1794 Male, age 80, right hemisphere 145.0
1847 Female, age 91, left hemisphere 140.3
2521 Female, age 94, right hemisphere 131.1
1841 Female, age 85, right hemisphere 119.7
2848 Male, age 76, right hemisphere 118.0
Subiculum
nTPM: 115.2
1977 Female, age 85, both hemispheres 127.1
1901 Male, age 80, both hemispheres 119.2
2619 Male, age 74, both hemispheres 117.9
2438 Female, age 94, left hemisphere 112.4
2042 Male, age 76, both hemispheres 107.7
2729 Female, age 91, right hemisphere 107.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 152.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 152.6
Samples: 197

Max nTPM: 317.3
Min nTPM: 48.0
Std nTPM: 50.5
Median nTPM: 149.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 317.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 290.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 285.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 278.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 275.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 268.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 266.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 265.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 261.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 255.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 252.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.8
FF:10169-103B7 60 years, female 104.6
FF:10153-102I9 76 years, female 90.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.5
Samples: 4

Max nTPM: 38.9
Min nTPM: 27.1
Sample A Female 38.9
Sample B Female 29.6
Sample C Male 30.2
Sample D Male 27.1
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 32.0
Min nTPM: 25.6
Sample A Female 32.0
Sample B Female 31.6
Sample C Male 27.7
Sample D Male 25.6
Subiculum
nTPM: 26.5
Samples: 4

Max nTPM: 35.4
Min nTPM: 22.3
Sample A Female 35.4
Sample B Female 23.0
Sample C Male 25.1
Sample D Male 22.3
Ventral hippocampus
nTPM: 28.1
Samples: 4

Max nTPM: 33.5
Min nTPM: 19.7
Sample A Female 28.9
Sample B Female 19.7
Sample C Male 33.5
Sample D Male 30.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 180.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 180.0
Samples: 4

Max nTPM: 183.0
Min nTPM: 174.8
Sample A Male 180.7
Sample B Male 183.0
Sample C Female 174.8
Sample D Female 181.5
Hippocampal formation
nTPM: 166.9
Samples: 4

Max nTPM: 175.7
Min nTPM: 158.0
Sample A Male 167.2
Sample B Male 158.0
Sample C Female 166.8
Sample D Female 175.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
71496300 Antisense, RP_050913_04_C05, Mouse strain C57BL/6J (56 days, male) 1.2

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