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CTDNEP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:49.9 nTPM
HPA:49.9 nTPM
GTEx:84.8 nTPM
FANTOM5:184.5 Scaled Tags Per Million
Pig:32.1 nTPM
Mouse:90.9 nTPM
Allen mouse:8.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037439
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.9
Sample id Sample description nTPM
Hippocampus
nTPM: 49.7
2621 Female, age 67, right hemisphere 52.1
2529 Female, age 94, left hemisphere 50.9
1855 Male, age 76, left hemisphere 49.5
2148 Female, age 91, left hemisphere 48.9
1898 Male, age 80, left hemisphere 48.5
1911 Female, age 85, right hemisphere 48.0
Dentate gyrus
nTPM: 48.6
2530 Female, age 94, left hemisphere 52.7
2531 Female, age 67, both hemispheres 50.2
2010 Male, age 76, both hemispheres 48.5
2528 Male, age 74, both hemispheres 47.1
1927 Female, age 91, both hemispheres 46.4
2246 Female, age 85, both hemispheres 46.4
Entorhinal gyrus
nTPM: 49.9
2117 Female, age 91, right hemisphere 51.5
2686 Male, age 75, right hemisphere 50.6
2613 Female, age 94, left hemisphere 50.4
1787 Male, age 76, left hemisphere 50.3
2764 Male, age 80, right hemisphere 49.2
1938 Female, age 85, left hemisphere 47.2
Hippocampus, CA1
nTPM: 46.2
2749 Male, age 80, left hemisphere 47.3
1873 Female, age 85, both hemispheres 46.9
2527 Male, age 74, both hemispheres 46.7
2045 Male, age 76, both hemispheres 45.7
2082 Female, age 91, right hemisphere 44.7
Hippocampus, CA2
nTPM: 46.8
2437 Female, age 94, left hemisphere 48.4
1963 Male, age 80, left hemisphere 47.7
1940 Female, age 85, left hemisphere 47.3
1892 Male, age 76, both hemispheres 46.5
2113 Female, age 91, right hemisphere 45.8
2249 Male, age 74, both hemispheres 45.0
Hippocampus, CA3
nTPM: 49.3
2861 Female, age 67, both hemispheres 55.6
2620 Female, age 94, left hemisphere 50.9
1891 Female, age 85, both hemispheres 48.0
2137 Male, age 80, left hemisphere 47.7
1867 Male, age 76, both hemispheres 47.6
2436 Male, age 74, both hemispheres 46.2
Parahippocampal cortex
nTPM: 48.2
2692 Male, age 74, both hemispheres 51.2
2622 Female, age 67, right hemisphere 50.8
2532 Female, age 72, left hemisphere 49.5
2245 Female, age 91, both hemispheres 49.0
1990 Female, age 91, right hemisphere 47.4
1850 Male, age 80, both hemispheres 47.3
1933 Female, age 85, both hemispheres 47.2
2250 Female, age 67, right hemisphere 46.8
2018 Male, age 76, both hemispheres 46.5
2693 Female, age 94, both hemispheres 45.8
Perirhinal gyrus
nTPM: 46.7
2848 Male, age 76, right hemisphere 47.2
1841 Female, age 85, right hemisphere 46.8
2521 Female, age 94, right hemisphere 46.6
1794 Male, age 80, right hemisphere 46.5
1847 Female, age 91, left hemisphere 46.4
Subiculum
nTPM: 48.6
2619 Male, age 74, both hemispheres 50.5
2042 Male, age 76, both hemispheres 49.1
2438 Female, age 94, left hemisphere 48.4
1901 Male, age 80, both hemispheres 48.3
2729 Female, age 91, right hemisphere 48.3
1977 Female, age 85, both hemispheres 47.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 84.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 84.8
Samples: 197

Max nTPM: 136.5
Min nTPM: 52.2
Std nTPM: 14.0
Median nTPM: 82.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 136.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 131.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 122.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 120.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 120.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 117.7
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 114.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 111.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 109.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 108.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 108.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 184.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 184.5
FF:10169-103B7 60 years, female 186.2
FF:10153-102I9 76 years, female 182.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 40.4
Min nTPM: 24.9
Sample A Female 40.4
Sample B Female 31.8
Sample C Male 31.5
Sample D Male 24.9
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 31.7
Min nTPM: 25.9
Sample A Female 31.5
Sample B Female 30.9
Sample C Male 31.7
Sample D Male 25.9
Subiculum
nTPM: 28.1
Samples: 4

Max nTPM: 36.7
Min nTPM: 23.8
Sample A Female 36.7
Sample B Female 25.7
Sample C Male 26.0
Sample D Male 23.8
Ventral hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 37.8
Min nTPM: 23.4
Sample A Female 31.4
Sample B Female 23.4
Sample C Male 37.8
Sample D Male 32.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 80.5
Samples: 4

Max nTPM: 92.2
Min nTPM: 73.1
Sample A Male 73.1
Sample B Male 77.6
Sample C Female 79.0
Sample D Female 92.2
Hippocampal formation
nTPM: 91.0
Samples: 4

Max nTPM: 101.9
Min nTPM: 82.5
Sample A Male 90.6
Sample B Male 82.5
Sample C Female 101.9
Sample D Female 88.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.7
70473867 Antisense, RP_050614_04_D08, Mouse strain C57BL/6J (56 days, male) 8.7

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The Human Protein Atlas

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