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BNIP3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:71.2 nTPM
HPA:71.2 nTPM
GTEx:71.8 nTPM
FANTOM5:53.6 Scaled Tags Per Million
Pig:50.0 nTPM
Mouse:143.1 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003015Antibody CAB011676
Glial cells Not detectedMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.2
Sample id Sample description nTPM
Hippocampus
nTPM: 61.5
1898 Male, age 80, left hemisphere 69.4
1855 Male, age 76, left hemisphere 64.9
2621 Female, age 67, right hemisphere 62.8
2148 Female, age 91, left hemisphere 58.6
1911 Female, age 85, right hemisphere 58.0
2529 Female, age 94, left hemisphere 55.1
Dentate gyrus
nTPM: 58.4
2010 Male, age 76, both hemispheres 77.8
1927 Female, age 91, both hemispheres 61.9
2528 Male, age 74, both hemispheres 57.2
2246 Female, age 85, both hemispheres 54.5
2530 Female, age 94, left hemisphere 52.0
2531 Female, age 67, both hemispheres 46.9
Entorhinal gyrus
nTPM: 51.5
2764 Male, age 80, right hemisphere 59.7
1938 Female, age 85, left hemisphere 55.7
2613 Female, age 94, left hemisphere 51.5
1787 Male, age 76, left hemisphere 49.4
2117 Female, age 91, right hemisphere 48.3
2686 Male, age 75, right hemisphere 44.8
Hippocampus, CA1
nTPM: 71.2
2749 Male, age 80, left hemisphere 91.6
2527 Male, age 74, both hemispheres 75.5
2045 Male, age 76, both hemispheres 67.2
1873 Female, age 85, both hemispheres 66.4
2082 Female, age 91, right hemisphere 55.1
Hippocampus, CA2
nTPM: 59.2
2249 Male, age 74, both hemispheres 72.8
1963 Male, age 80, left hemisphere 66.1
1892 Male, age 76, both hemispheres 63.5
2113 Female, age 91, right hemisphere 54.5
2437 Female, age 94, left hemisphere 49.4
1940 Female, age 85, left hemisphere 49.0
Hippocampus, CA3
nTPM: 58.8
2137 Male, age 80, left hemisphere 69.9
2436 Male, age 74, both hemispheres 64.0
1867 Male, age 76, both hemispheres 62.9
1891 Female, age 85, both hemispheres 55.1
2620 Female, age 94, left hemisphere 51.7
2861 Female, age 67, both hemispheres 49.0
Parahippocampal cortex
nTPM: 55.3
2018 Male, age 76, both hemispheres 71.1
1850 Male, age 80, both hemispheres 59.7
2250 Female, age 67, right hemisphere 57.8
2532 Female, age 72, left hemisphere 56.4
1933 Female, age 85, both hemispheres 55.1
2245 Female, age 91, both hemispheres 54.9
1990 Female, age 91, right hemisphere 52.4
2692 Male, age 74, both hemispheres 51.0
2622 Female, age 67, right hemisphere 49.9
2693 Female, age 94, both hemispheres 45.2
Perirhinal gyrus
nTPM: 55.8
1847 Female, age 91, left hemisphere 65.1
1841 Female, age 85, right hemisphere 60.0
1794 Male, age 80, right hemisphere 59.6
2521 Female, age 94, right hemisphere 52.5
2848 Male, age 76, right hemisphere 42.1
Subiculum
nTPM: 55.2
2619 Male, age 74, both hemispheres 61.5
1901 Male, age 80, both hemispheres 59.7
1977 Female, age 85, both hemispheres 55.7
2042 Male, age 76, both hemispheres 53.7
2438 Female, age 94, left hemisphere 53.6
2729 Female, age 91, right hemisphere 46.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.8
Samples: 197

Max nTPM: 176.2
Min nTPM: 27.2
Std nTPM: 21.3
Median nTPM: 69.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 176.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 150.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 132.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 126.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 114.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 111.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 108.7
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 108.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 106.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 106.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 105.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.6
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 48.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.4
Samples: 4

Max nTPM: 64.2
Min nTPM: 34.2
Sample A Female 64.2
Sample B Female 48.1
Sample C Male 43.0
Sample D Male 34.2
Entorhinal cortex
nTPM: 48.7
Samples: 4

Max nTPM: 56.5
Min nTPM: 39.3
Sample A Female 46.8
Sample B Female 56.5
Sample C Male 52.0
Sample D Male 39.3
Subiculum
nTPM: 43.8
Samples: 4

Max nTPM: 55.7
Min nTPM: 35.9
Sample A Female 55.7
Sample B Female 43.9
Sample C Male 39.8
Sample D Male 35.9
Ventral hippocampus
nTPM: 50.0
Samples: 4

Max nTPM: 62.7
Min nTPM: 39.2
Sample A Female 53.6
Sample B Female 39.2
Sample C Male 62.7
Sample D Male 44.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 143.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 143.1
Samples: 4

Max nTPM: 155.4
Min nTPM: 132.3
Sample A Male 142.3
Sample B Male 155.4
Sample C Female 142.4
Sample D Female 132.3
Hippocampal formation
nTPM: 135.3
Samples: 4

Max nTPM: 165.7
Min nTPM: 118.4
Sample A Male 165.7
Sample B Male 118.4
Sample C Female 129.7
Sample D Female 127.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
75077193 Antisense, RP_060412_02_E05, Mouse strain C57BL/6J (56 days, male) 15.4
68745353 Antisense, RP_050210_01_G07, Mouse strain C57BL/6J (56 days, male) 7.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.