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LPCAT4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:18.8 nTPM
HPA:18.8 nTPM
GTEx:28.2 nTPM
FANTOM5:52.1 Scaled Tags Per Million
Pig:62.5 nTPM
Mouse:38.3 nTPM
Allen mouse:17.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057321
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.8
Sample id Sample description nTPM
Hippocampus
nTPM: 10.8
1898 Male, age 80, left hemisphere 14.8
2621 Female, age 67, right hemisphere 13.3
2148 Female, age 91, left hemisphere 11.8
1855 Male, age 76, left hemisphere 9.2
1911 Female, age 85, right hemisphere 8.2
2529 Female, age 94, left hemisphere 7.7
Dentate gyrus
nTPM: 13.3
2530 Female, age 94, left hemisphere 16.2
1927 Female, age 91, both hemispheres 14.8
2531 Female, age 67, both hemispheres 14.0
2528 Male, age 74, both hemispheres 12.9
2246 Female, age 85, both hemispheres 11.7
2010 Male, age 76, both hemispheres 10.1
Entorhinal gyrus
nTPM: 15.9
2613 Female, age 94, left hemisphere 27.9
2764 Male, age 80, right hemisphere 18.0
1787 Male, age 76, left hemisphere 15.8
1938 Female, age 85, left hemisphere 14.6
2686 Male, age 75, right hemisphere 12.1
2117 Female, age 91, right hemisphere 7.3
Hippocampus, CA1
nTPM: 12.6
2749 Male, age 80, left hemisphere 20.4
2527 Male, age 74, both hemispheres 12.6
1873 Female, age 85, both hemispheres 10.9
2045 Male, age 76, both hemispheres 10.6
2082 Female, age 91, right hemisphere 8.6
Hippocampus, CA2
nTPM: 12.3
1892 Male, age 76, both hemispheres 17.5
2437 Female, age 94, left hemisphere 16.9
2249 Male, age 74, both hemispheres 10.8
1963 Male, age 80, left hemisphere 10.7
1940 Female, age 85, left hemisphere 8.9
2113 Female, age 91, right hemisphere 8.8
Hippocampus, CA3
nTPM: 13.3
2620 Female, age 94, left hemisphere 16.8
2137 Male, age 80, left hemisphere 16.6
1867 Male, age 76, both hemispheres 13.3
2861 Female, age 67, both hemispheres 12.3
2436 Male, age 74, both hemispheres 10.9
1891 Female, age 85, both hemispheres 9.7
Parahippocampal cortex
nTPM: 14.7
2693 Female, age 94, both hemispheres 18.3
1990 Female, age 91, right hemisphere 17.5
2245 Female, age 91, both hemispheres 16.6
1850 Male, age 80, both hemispheres 15.8
2250 Female, age 67, right hemisphere 15.6
2622 Female, age 67, right hemisphere 14.9
1933 Female, age 85, both hemispheres 13.5
2692 Male, age 74, both hemispheres 12.4
2532 Female, age 72, left hemisphere 11.5
2018 Male, age 76, both hemispheres 10.6
Perirhinal gyrus
nTPM: 18.8
2521 Female, age 94, right hemisphere 24.7
1847 Female, age 91, left hemisphere 21.8
1794 Male, age 80, right hemisphere 18.1
1841 Female, age 85, right hemisphere 16.0
2848 Male, age 76, right hemisphere 13.5
Subiculum
nTPM: 11.7
1977 Female, age 85, both hemispheres 15.8
2438 Female, age 94, left hemisphere 15.4
1901 Male, age 80, both hemispheres 13.1
2619 Male, age 74, both hemispheres 12.1
2729 Female, age 91, right hemisphere 7.1
2042 Male, age 76, both hemispheres 6.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 88.1
Min nTPM: 3.0
Std nTPM: 17.6
Median nTPM: 24.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 88.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 86.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 73.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 73.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 71.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 66.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 64.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 63.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 62.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 61.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 59.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.1
FF:10153-102I9 76 years, female 65.4
FF:10169-103B7 60 years, female 38.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.6
Samples: 4

Max nTPM: 56.6
Min nTPM: 45.9
Sample A Female 56.6
Sample B Female 49.3
Sample C Male 46.6
Sample D Male 45.9
Entorhinal cortex
nTPM: 62.5
Samples: 4

Max nTPM: 68.9
Min nTPM: 58.2
Sample A Female 68.9
Sample B Female 59.0
Sample C Male 64.0
Sample D Male 58.2
Subiculum
nTPM: 46.5
Samples: 4

Max nTPM: 63.1
Min nTPM: 39.8
Sample A Female 63.1
Sample B Female 39.8
Sample C Male 42.9
Sample D Male 40.2
Ventral hippocampus
nTPM: 47.6
Samples: 4

Max nTPM: 57.2
Min nTPM: 33.4
Sample A Female 43.0
Sample B Female 33.4
Sample C Male 57.2
Sample D Male 56.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 46.6
Min nTPM: 28.8
Sample A Male 41.3
Sample B Male 46.6
Sample C Female 28.8
Sample D Female 36.7
Hippocampal formation
nTPM: 29.2
Samples: 4

Max nTPM: 32.5
Min nTPM: 26.2
Sample A Male 28.8
Sample B Male 29.3
Sample C Female 26.2
Sample D Female 32.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.0
73606648 Antisense, RP_051130_01_C12, Mouse strain C57BL/6J (56 days, male) 17.0

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