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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:23.0 nTPM
HPA:23.0 nTPM
GTEx:24.4 nTPM
FANTOM5:34.2 Scaled Tags Per Million
Pig:12.0 nTPM
Mouse:7.3 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026495
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.3
2529 Female, age 94, left hemisphere 23.9
1911 Female, age 85, right hemisphere 22.7
2148 Female, age 91, left hemisphere 21.0
2621 Female, age 67, right hemisphere 20.4
1898 Male, age 80, left hemisphere 20.1
1855 Male, age 76, left hemisphere 19.9
Dentate gyrus
nTPM: 20.6
2530 Female, age 94, left hemisphere 22.7
2528 Male, age 74, both hemispheres 21.9
2246 Female, age 85, both hemispheres 21.7
1927 Female, age 91, both hemispheres 20.3
2531 Female, age 67, both hemispheres 19.1
2010 Male, age 76, both hemispheres 17.9
Entorhinal gyrus
nTPM: 22.2
2117 Female, age 91, right hemisphere 26.1
2686 Male, age 75, right hemisphere 25.1
2613 Female, age 94, left hemisphere 21.2
1938 Female, age 85, left hemisphere 21.0
1787 Male, age 76, left hemisphere 19.8
2764 Male, age 80, right hemisphere 19.7
Hippocampus, CA1
nTPM: 20.0
2527 Male, age 74, both hemispheres 23.1
2082 Female, age 91, right hemisphere 21.4
1873 Female, age 85, both hemispheres 20.9
2749 Male, age 80, left hemisphere 18.1
2045 Male, age 76, both hemispheres 16.6
Hippocampus, CA2
nTPM: 20.8
1963 Male, age 80, left hemisphere 22.4
2437 Female, age 94, left hemisphere 22.0
2113 Female, age 91, right hemisphere 21.5
1892 Male, age 76, both hemispheres 19.9
2249 Male, age 74, both hemispheres 19.6
1940 Female, age 85, left hemisphere 19.4
Hippocampus, CA3
nTPM: 19.4
1891 Female, age 85, both hemispheres 24.0
2436 Male, age 74, both hemispheres 19.3
1867 Male, age 76, both hemispheres 18.7
2137 Male, age 80, left hemisphere 18.7
2620 Female, age 94, left hemisphere 18.5
2861 Female, age 67, both hemispheres 17.4
Parahippocampal cortex
nTPM: 21.8
2692 Male, age 74, both hemispheres 27.0
1933 Female, age 85, both hemispheres 23.9
1850 Male, age 80, both hemispheres 22.7
2693 Female, age 94, both hemispheres 22.6
2532 Female, age 72, left hemisphere 22.2
2622 Female, age 67, right hemisphere 21.6
1990 Female, age 91, right hemisphere 21.4
2245 Female, age 91, both hemispheres 20.9
2250 Female, age 67, right hemisphere 18.8
2018 Male, age 76, both hemispheres 17.2
Perirhinal gyrus
nTPM: 20.5
2848 Male, age 76, right hemisphere 22.6
1794 Male, age 80, right hemisphere 20.7
2521 Female, age 94, right hemisphere 20.0
1841 Female, age 85, right hemisphere 19.7
1847 Female, age 91, left hemisphere 19.6
Subiculum
nTPM: 23.0
2438 Female, age 94, left hemisphere 25.0
2619 Male, age 74, both hemispheres 23.0
1901 Male, age 80, both hemispheres 22.9
2729 Female, age 91, right hemisphere 22.8
1977 Female, age 85, both hemispheres 22.7
2042 Male, age 76, both hemispheres 21.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.4
Samples: 197

Max nTPM: 51.3
Min nTPM: 8.8
Std nTPM: 7.8
Median nTPM: 23.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 51.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 50.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 49.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 48.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 45.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 44.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 42.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 40.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 40.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 40.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 39.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.2
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 33.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 13.3
Min nTPM: 9.5
Sample A Female 13.3
Sample B Female 11.8
Sample C Male 11.8
Sample D Male 9.5
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 12.5
Min nTPM: 11.5
Sample A Female 12.0
Sample B Female 12.5
Sample C Male 11.8
Sample D Male 11.5
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 12.7
Min nTPM: 10.1
Sample A Female 12.7
Sample B Female 11.3
Sample C Male 10.1
Sample D Male 10.4
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 12.2
Min nTPM: 8.3
Sample A Female 12.2
Sample B Female 10.8
Sample C Male 8.3
Sample D Male 10.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.5
Sample A Male 7.7
Sample B Male 7.3
Sample C Female 6.9
Sample D Female 5.5
Hippocampal formation
nTPM: 7.2
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 7.9
Sample C Female 6.5
Sample D Female 8.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
75774631 Antisense, RP_060530_01_A08, Mouse strain C57BL/6J (56 days, male) 4.4
75773702 Antisense, RP_060530_01_A08, Mouse strain C57BL/6J (56 days, male) 3.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.