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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:54.6 nTPM
HPA:54.6 nTPM
GTEx:52.7 nTPM
FANTOM5:69.5 Scaled Tags Per Million
Pig:15.6 nTPM
Mouse:109.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.6
Sample id Sample description nTPM
Hippocampus
nTPM: 53.7
1898 Male, age 80, left hemisphere 56.7
2529 Female, age 94, left hemisphere 54.0
1855 Male, age 76, left hemisphere 53.4
1911 Female, age 85, right hemisphere 52.9
2148 Female, age 91, left hemisphere 52.8
2621 Female, age 67, right hemisphere 52.4
Dentate gyrus
nTPM: 53.7
2010 Male, age 76, both hemispheres 54.8
1927 Female, age 91, both hemispheres 54.3
2246 Female, age 85, both hemispheres 54.1
2528 Male, age 74, both hemispheres 54.0
2531 Female, age 67, both hemispheres 52.5
2530 Female, age 94, left hemisphere 52.4
Entorhinal gyrus
nTPM: 52.9
1938 Female, age 85, left hemisphere 55.4
1787 Male, age 76, left hemisphere 54.3
2117 Female, age 91, right hemisphere 53.3
2764 Male, age 80, right hemisphere 51.6
2613 Female, age 94, left hemisphere 51.5
2686 Male, age 75, right hemisphere 51.0
Hippocampus, CA1
nTPM: 53.7
2749 Male, age 80, left hemisphere 54.9
1873 Female, age 85, both hemispheres 54.6
2527 Male, age 74, both hemispheres 53.9
2082 Female, age 91, right hemisphere 53.3
2045 Male, age 76, both hemispheres 51.8
Hippocampus, CA2
nTPM: 53.9
2249 Male, age 74, both hemispheres 55.2
1892 Male, age 76, both hemispheres 55.1
1940 Female, age 85, left hemisphere 54.6
1963 Male, age 80, left hemisphere 53.0
2437 Female, age 94, left hemisphere 52.9
2113 Female, age 91, right hemisphere 52.8
Hippocampus, CA3
nTPM: 53.3
2436 Male, age 74, both hemispheres 54.7
1867 Male, age 76, both hemispheres 54.5
1891 Female, age 85, both hemispheres 54.2
2137 Male, age 80, left hemisphere 53.5
2620 Female, age 94, left hemisphere 52.6
2861 Female, age 67, both hemispheres 50.1
Parahippocampal cortex
nTPM: 53.6
1990 Female, age 91, right hemisphere 55.7
1850 Male, age 80, both hemispheres 55.6
2018 Male, age 76, both hemispheres 54.3
1933 Female, age 85, both hemispheres 54.0
2250 Female, age 67, right hemisphere 53.8
2532 Female, age 72, left hemisphere 53.7
2692 Male, age 74, both hemispheres 52.8
2693 Female, age 94, both hemispheres 52.4
2245 Female, age 91, both hemispheres 52.2
2622 Female, age 67, right hemisphere 51.1
Perirhinal gyrus
nTPM: 54.6
1841 Female, age 85, right hemisphere 56.6
1794 Male, age 80, right hemisphere 56.0
1847 Female, age 91, left hemisphere 54.9
2521 Female, age 94, right hemisphere 53.1
2848 Male, age 76, right hemisphere 52.3
Subiculum
nTPM: 54.0
2438 Female, age 94, left hemisphere 60.1
1977 Female, age 85, both hemispheres 53.9
1901 Male, age 80, both hemispheres 53.0
2042 Male, age 76, both hemispheres 53.0
2619 Male, age 74, both hemispheres 52.8
2729 Female, age 91, right hemisphere 51.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.7
Samples: 197

Max nTPM: 227.4
Min nTPM: 26.6
Std nTPM: 18.0
Median nTPM: 49.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 227.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 120.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 98.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 88.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 84.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 80.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 79.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 79.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 79.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 78.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 76.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.5
FF:10169-103B7 60 years, female 81.6
FF:10153-102I9 76 years, female 57.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 20.3
Min nTPM: 10.9
Sample A Female 20.3
Sample B Female 13.0
Sample C Male 18.0
Sample D Male 10.9
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.0
Sample A Female 13.1
Sample B Female 13.6
Sample C Male 13.0
Sample D Male 10.0
Subiculum
nTPM: 12.8
Samples: 4

Max nTPM: 16.4
Min nTPM: 11.2
Sample A Female 16.4
Sample B Female 11.2
Sample C Male 11.3
Sample D Male 12.3
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 15.8
Min nTPM: 11.3
Sample A Female 15.8
Sample B Female 11.8
Sample C Male 11.3
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.0
Samples: 4

Max nTPM: 113.4
Min nTPM: 105.3
Sample A Male 107.5
Sample B Male 109.9
Sample C Female 113.4
Sample D Female 105.3
Hippocampal formation
nTPM: 109.7
Samples: 4

Max nTPM: 153.4
Min nTPM: 86.9
Sample A Male 153.4
Sample B Male 103.2
Sample C Female 95.2
Sample D Female 86.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70609184 Antisense, RP_050412_02_H06, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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