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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: Not detected
Synapses: Medium
RNA expressioni
Consensus:35.9 nTPM
HPA:35.9 nTPM
GTEx:118.5 nTPM
FANTOM5:507.4 Scaled Tags Per Million
Pig:133.6 nTPM
Mouse:165.5 nTPM
Allen mouse:19.3 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA067773
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Not detected
Synapses Medium

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067773
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.9
Sample id Sample description nTPM
Hippocampus
nTPM: 0.7
2621 Female, age 67, right hemisphere 4.6
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 5.5
1927 Female, age 91, both hemispheres 20.3
2530 Female, age 94, left hemisphere 10.8
2531 Female, age 67, both hemispheres 2.2
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 35.9
2613 Female, age 94, left hemisphere 139.9
2686 Male, age 75, right hemisphere 73.4
2764 Male, age 80, right hemisphere 2.3
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 15.5
2749 Male, age 80, left hemisphere 71.6
2527 Male, age 74, both hemispheres 6.2
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 21.0
2620 Female, age 94, left hemisphere 60.0
2861 Female, age 67, both hemispheres 39.4
2137 Male, age 80, left hemisphere 27.1
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 20.7
2622 Female, age 67, right hemisphere 97.4
2245 Female, age 91, both hemispheres 51.8
2693 Female, age 94, both hemispheres 26.6
2692 Male, age 74, both hemispheres 20.1
1990 Female, age 91, right hemisphere 11.5
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2532 Female, age 72, left hemisphere 0.0
Perirhinal gyrus
nTPM: 14.9
1847 Female, age 91, left hemisphere 59.2
2521 Female, age 94, right hemisphere 9.8
1794 Male, age 80, right hemisphere 5.5
1841 Female, age 85, right hemisphere 0.0
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 0.7
2619 Male, age 74, both hemispheres 4.3
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 118.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 118.5
Samples: 197

Max nTPM: 279.5
Min nTPM: 0.5
Std nTPM: 68.9
Median nTPM: 114.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 279.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 277.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 274.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 273.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 272.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 261.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 252.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 243.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 240.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 240.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 229.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 507.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 507.4
FF:10169-103B7 60 years, female 685.3
FF:10153-102I9 76 years, female 329.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 133.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 133.6
Samples: 4

Max nTPM: 173.6
Min nTPM: 95.2
Sample A Female 173.6
Sample B Female 164.7
Sample C Male 100.8
Sample D Male 95.2
Entorhinal cortex
nTPM: 132.9
Samples: 4

Max nTPM: 152.5
Min nTPM: 116.5
Sample A Female 152.5
Sample B Female 116.5
Sample C Male 141.2
Sample D Male 121.3
Subiculum
nTPM: 111.4
Samples: 4

Max nTPM: 163.8
Min nTPM: 79.1
Sample A Female 163.8
Sample B Female 87.8
Sample C Male 114.8
Sample D Male 79.1
Ventral hippocampus
nTPM: 120.9
Samples: 4

Max nTPM: 163.3
Min nTPM: 75.4
Sample A Female 106.8
Sample B Female 75.4
Sample C Male 138.2
Sample D Male 163.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 165.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 150.5
Samples: 4

Max nTPM: 173.7
Min nTPM: 133.9
Sample A Male 150.2
Sample B Male 144.1
Sample C Female 133.9
Sample D Female 173.7
Hippocampal formation
nTPM: 165.5
Samples: 4

Max nTPM: 192.4
Min nTPM: 130.4
Sample A Male 130.4
Sample B Male 185.0
Sample C Female 192.4
Sample D Female 154.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.3
79632316 Antisense, RP_071204_01_C09, Mouse strain C57BL/6J (56 days, male) 23.6
79556694 Antisense, RP_071204_01_C09, Mouse strain C57BL/6J (56 days, male) 23.6
1585 Antisense, RP_040526_01_F03, Mouse strain C57BL/6J (56 days, male) 14.9
1586 Antisense, RP_040526_01_F03, Mouse strain C57BL/6J (56 days, male) 12.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.