ABOUTMENU
HELP
NEWS
PNMA1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:77.3 nTPM
HPA:77.3 nTPM
GTEx:63.9 nTPM
FANTOM5:229.3 Scaled Tags Per Million
Mouse:3.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003817Antibody HPA015007
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.3
Sample id Sample description nTPM
Hippocampus
nTPM: 65.0
1898 Male, age 80, left hemisphere 72.7
2621 Female, age 67, right hemisphere 69.9
2148 Female, age 91, left hemisphere 69.6
2529 Female, age 94, left hemisphere 64.6
1855 Male, age 76, left hemisphere 60.4
1911 Female, age 85, right hemisphere 53.0
Dentate gyrus
nTPM: 67.2
1927 Female, age 91, both hemispheres 74.6
2530 Female, age 94, left hemisphere 72.7
2010 Male, age 76, both hemispheres 66.6
2528 Male, age 74, both hemispheres 64.3
2531 Female, age 67, both hemispheres 62.7
2246 Female, age 85, both hemispheres 62.1
Entorhinal gyrus
nTPM: 72.3
2764 Male, age 80, right hemisphere 83.1
2613 Female, age 94, left hemisphere 82.0
1938 Female, age 85, left hemisphere 80.3
1787 Male, age 76, left hemisphere 74.6
2117 Female, age 91, right hemisphere 59.4
2686 Male, age 75, right hemisphere 54.4
Hippocampus, CA1
nTPM: 71.0
2749 Male, age 80, left hemisphere 96.8
2045 Male, age 76, both hemispheres 70.3
1873 Female, age 85, both hemispheres 70.1
2527 Male, age 74, both hemispheres 67.2
2082 Female, age 91, right hemisphere 50.4
Hippocampus, CA2
nTPM: 63.1
1892 Male, age 76, both hemispheres 75.2
1963 Male, age 80, left hemisphere 72.3
2249 Male, age 74, both hemispheres 62.8
2437 Female, age 94, left hemisphere 60.7
1940 Female, age 85, left hemisphere 55.0
2113 Female, age 91, right hemisphere 52.4
Hippocampus, CA3
nTPM: 67.1
2620 Female, age 94, left hemisphere 88.4
2137 Male, age 80, left hemisphere 69.8
1867 Male, age 76, both hemispheres 68.3
2861 Female, age 67, both hemispheres 63.9
2436 Male, age 74, both hemispheres 56.9
1891 Female, age 85, both hemispheres 55.0
Parahippocampal cortex
nTPM: 66.9
1850 Male, age 80, both hemispheres 75.1
2532 Female, age 72, left hemisphere 74.5
2245 Female, age 91, both hemispheres 73.1
1990 Female, age 91, right hemisphere 71.6
1933 Female, age 85, both hemispheres 70.5
2622 Female, age 67, right hemisphere 70.3
2250 Female, age 67, right hemisphere 64.3
2692 Male, age 74, both hemispheres 58.4
2018 Male, age 76, both hemispheres 56.9
2693 Female, age 94, both hemispheres 54.5
Perirhinal gyrus
nTPM: 77.3
1794 Male, age 80, right hemisphere 87.2
1847 Female, age 91, left hemisphere 85.2
1841 Female, age 85, right hemisphere 75.4
2521 Female, age 94, right hemisphere 70.0
2848 Male, age 76, right hemisphere 68.8
Subiculum
nTPM: 59.8
1977 Female, age 85, both hemispheres 73.4
2619 Male, age 74, both hemispheres 67.8
1901 Male, age 80, both hemispheres 60.0
2438 Female, age 94, left hemisphere 58.0
2729 Female, age 91, right hemisphere 53.3
2042 Male, age 76, both hemispheres 46.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.9
Samples: 197

Max nTPM: 124.3
Min nTPM: 24.5
Std nTPM: 21.8
Median nTPM: 60.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 124.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 122.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 121.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 116.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 116.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 115.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 114.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 111.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 110.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 105.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 105.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 229.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 229.3
FF:10153-102I9 76 years, female 230.6
FF:10169-103B7 60 years, female 228.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.6
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.8
Sample A Male 3.3
Sample B Male 4.2
Sample C Female 2.8
Sample D Female 4.2
Hippocampal formation
nTPM: 2.5
Samples: 4

Max nTPM: 3.3
Min nTPM: 1.8
Sample A Male 3.3
Sample B Male 2.3
Sample C Female 1.8
Sample D Female 2.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69816368 Antisense, RP_050505_04_H06, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.