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SAMD9L
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:3.6 nTPM
HPA:3.6 nTPM
GTEx:2.7 nTPM
FANTOM5:8.6 Scaled Tags Per Million
Mouse:2.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019461Antibody HPA019465Antibody HPA019488
Glial cells Not detectedMediumMedium
Neuronal cells Not detectedMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 3.6
Sample id Sample description nTPM
Hippocampus
nTPM: 3.6
1855 Male, age 76, left hemisphere 4.6
2529 Female, age 94, left hemisphere 4.0
2148 Female, age 91, left hemisphere 3.7
1898 Male, age 80, left hemisphere 3.4
1911 Female, age 85, right hemisphere 3.2
2621 Female, age 67, right hemisphere 2.9
Dentate gyrus
nTPM: 2.8
2010 Male, age 76, both hemispheres 3.3
2246 Female, age 85, both hemispheres 2.9
2528 Male, age 74, both hemispheres 2.8
1927 Female, age 91, both hemispheres 2.7
2530 Female, age 94, left hemisphere 2.6
2531 Female, age 67, both hemispheres 2.6
Entorhinal gyrus
nTPM: 3.1
2117 Female, age 91, right hemisphere 4.6
1787 Male, age 76, left hemisphere 3.5
2686 Male, age 75, right hemisphere 3.3
1938 Female, age 85, left hemisphere 2.7
2764 Male, age 80, right hemisphere 2.3
2613 Female, age 94, left hemisphere 2.2
Hippocampus, CA1
nTPM: 2.8
2082 Female, age 91, right hemisphere 3.5
2045 Male, age 76, both hemispheres 3.2
1873 Female, age 85, both hemispheres 2.8
2527 Male, age 74, both hemispheres 2.6
2749 Male, age 80, left hemisphere 1.9
Hippocampus, CA2
nTPM: 3.0
2113 Female, age 91, right hemisphere 3.5
2249 Male, age 74, both hemispheres 3.3
1940 Female, age 85, left hemisphere 3.1
1963 Male, age 80, left hemisphere 2.9
2437 Female, age 94, left hemisphere 2.7
1892 Male, age 76, both hemispheres 2.6
Hippocampus, CA3
nTPM: 2.8
1867 Male, age 76, both hemispheres 3.3
2861 Female, age 67, both hemispheres 3.3
1891 Female, age 85, both hemispheres 2.9
2436 Male, age 74, both hemispheres 2.5
2620 Female, age 94, left hemisphere 2.5
2137 Male, age 80, left hemisphere 2.2
Parahippocampal cortex
nTPM: 3.1
2018 Male, age 76, both hemispheres 3.8
2245 Female, age 91, both hemispheres 3.6
2250 Female, age 67, right hemisphere 3.2
2622 Female, age 67, right hemisphere 3.1
2692 Male, age 74, both hemispheres 3.1
1850 Male, age 80, both hemispheres 3.0
1990 Female, age 91, right hemisphere 3.0
2532 Female, age 72, left hemisphere 2.8
2693 Female, age 94, both hemispheres 2.7
1933 Female, age 85, both hemispheres 2.6
Perirhinal gyrus
nTPM: 2.9
2521 Female, age 94, right hemisphere 3.4
1847 Female, age 91, left hemisphere 3.3
2848 Male, age 76, right hemisphere 3.1
1794 Male, age 80, right hemisphere 2.5
1841 Female, age 85, right hemisphere 2.3
Subiculum
nTPM: 3.4
2438 Female, age 94, left hemisphere 4.2
2729 Female, age 91, right hemisphere 3.8
2042 Male, age 76, both hemispheres 3.6
2619 Male, age 74, both hemispheres 3.5
1901 Male, age 80, both hemispheres 2.9
1977 Female, age 85, both hemispheres 2.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.7
Samples: 197

Max nTPM: 26.1
Min nTPM: 0.5
Std nTPM: 2.3
Median nTPM: 2.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 26.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 14.1
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 10.5
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 9.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 8.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 6.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 6.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 5.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 5.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 5.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 4.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.6
FF:10153-102I9 76 years, female 10.9
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.6
Samples: 4

Max nTPM: 2.9
Min nTPM: 2.3
Sample A Male 2.3
Sample B Male 2.3
Sample C Female 2.9
Sample D Female 2.8
Hippocampal formation
nTPM: 1.7
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.3
Sample A Male 1.8
Sample B Male 1.3
Sample C Female 1.6
Sample D Female 1.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.