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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:39.1 nTPM
HPA:39.1 nTPM
GTEx:70.5 nTPM
FANTOM5:75.4 Scaled Tags Per Million
Mouse:28.7 nTPM
Allen mouse:21.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB003801Antibody CAB007780
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.1
Sample id Sample description nTPM
Hippocampus
nTPM: 34.6
1898 Male, age 80, left hemisphere 46.8
1855 Male, age 76, left hemisphere 33.2
2148 Female, age 91, left hemisphere 32.8
2529 Female, age 94, left hemisphere 32.3
2621 Female, age 67, right hemisphere 32.1
1911 Female, age 85, right hemisphere 30.2
Dentate gyrus
nTPM: 36.7
2531 Female, age 67, both hemispheres 44.2
2246 Female, age 85, both hemispheres 41.0
2528 Male, age 74, both hemispheres 36.2
1927 Female, age 91, both hemispheres 35.9
2530 Female, age 94, left hemisphere 32.3
2010 Male, age 76, both hemispheres 30.6
Entorhinal gyrus
nTPM: 29.6
2764 Male, age 80, right hemisphere 32.9
2686 Male, age 75, right hemisphere 31.2
2117 Female, age 91, right hemisphere 30.5
1787 Male, age 76, left hemisphere 29.3
1938 Female, age 85, left hemisphere 28.4
2613 Female, age 94, left hemisphere 25.2
Hippocampus, CA1
nTPM: 36.4
1873 Female, age 85, both hemispheres 41.8
2749 Male, age 80, left hemisphere 39.2
2082 Female, age 91, right hemisphere 37.1
2045 Male, age 76, both hemispheres 33.8
2527 Male, age 74, both hemispheres 30.2
Hippocampus, CA2
nTPM: 32.3
1940 Female, age 85, left hemisphere 39.8
2113 Female, age 91, right hemisphere 32.5
1892 Male, age 76, both hemispheres 32.4
2437 Female, age 94, left hemisphere 31.0
1963 Male, age 80, left hemisphere 29.5
2249 Male, age 74, both hemispheres 28.6
Hippocampus, CA3
nTPM: 35.2
2861 Female, age 67, both hemispheres 41.1
1867 Male, age 76, both hemispheres 38.1
2137 Male, age 80, left hemisphere 35.4
1891 Female, age 85, both hemispheres 34.6
2620 Female, age 94, left hemisphere 33.8
2436 Male, age 74, both hemispheres 28.3
Parahippocampal cortex
nTPM: 31.1
1850 Male, age 80, both hemispheres 38.5
1933 Female, age 85, both hemispheres 36.3
2250 Female, age 67, right hemisphere 33.5
2693 Female, age 94, both hemispheres 31.3
2245 Female, age 91, both hemispheres 31.2
2532 Female, age 72, left hemisphere 31.0
2018 Male, age 76, both hemispheres 29.4
1990 Female, age 91, right hemisphere 28.4
2692 Male, age 74, both hemispheres 25.9
2622 Female, age 67, right hemisphere 25.7
Perirhinal gyrus
nTPM: 39.1
1794 Male, age 80, right hemisphere 48.1
1841 Female, age 85, right hemisphere 41.5
1847 Female, age 91, left hemisphere 36.5
2521 Female, age 94, right hemisphere 35.7
2848 Male, age 76, right hemisphere 33.9
Subiculum
nTPM: 31.6
2729 Female, age 91, right hemisphere 35.9
1977 Female, age 85, both hemispheres 34.4
2042 Male, age 76, both hemispheres 32.3
1901 Male, age 80, both hemispheres 30.9
2438 Female, age 94, left hemisphere 30.2
2619 Male, age 74, both hemispheres 25.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.5
Samples: 197

Max nTPM: 286.7
Min nTPM: 15.4
Std nTPM: 46.8
Median nTPM: 52.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 286.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 278.2
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 218.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 214.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 202.6
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 197.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 193.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 191.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 183.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 170.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 163.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.4
FF:10153-102I9 76 years, female 79.6
FF:10169-103B7 60 years, female 71.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 26.2
Min nTPM: 21.2
Sample A Male 22.1
Sample B Male 21.2
Sample C Female 26.2
Sample D Female 25.7
Hippocampal formation
nTPM: 28.7
Samples: 4

Max nTPM: 33.3
Min nTPM: 25.0
Sample A Male 25.0
Sample B Male 33.3
Sample C Female 25.6
Sample D Female 30.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.4
2334 Antisense, RP_040420_01_B07, Mouse strain C57BL/6J (56 days, male) 21.4
2333 Antisense, RP_040420_01_B07, Mouse strain C57BL/6J (56 days, male) 18.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.