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POLR2L
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:71.0 nTPM
HPA:71.0 nTPM
GTEx:72.2 nTPM
FANTOM5:40.8 Scaled Tags Per Million
Mouse:15.4 nTPM

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 71.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 65.4
2586 Male, age 75, left hemisphere 71.0
2411 Female, age 72, unknown 67.4
1870 Female, age 42, unknown 66.4
2219 Male, age 76, both hemispheres 66.1
1833 Male, age 53, unknown 65.1
2828 Female, age 72, unknown 64.7
1827 Male, age 72, unknown 64.5
2666 Male, age 74, left hemisphere 64.4
1830 Male, age 51, unknown 63.5
2019 Male, age 18, unknown 60.6
Dorsal raphe nucleus
nTPM: 68.6
2047 Male, age 72, unknown 71.2
2298 Female, age 72, unknown 70.8
2750 Male, age 76, both hemispheres 67.4
1828 Male, age 53, unknown 67.3
2016 Female, age 72, unknown 66.2
Inferior colliculus
nTPM: 64.3
2849 Male, age 72, unknown 65.3
1890 Male, age 53, unknown 64.8
2097 Female, age 72, unknown 63.6
1848 Female, age 42, unknown 63.4
Median raphe nucleus
nTPM: 71.0
2220 Male, age 76, midline 71.0
Pedunculopontine tegmental nucleus
nTPM: 68.9
2334 Male, age 80, both hemispheres 71.1
2338 Male, age 61, both hemispheres 68.8
1921 Female, age 85, both hemispheres 66.9
Periaquaductal grey, anterior
nTPM: 66.8
1795 Male, age 51, unknown 70.2
2502 Female, age 75, unknown 66.6
1947 Male, age 18, unknown 63.5
Periaquaductal grey, dorsal
nTPM: 66.0
2850 Male, age 76, both hemispheres 71.6
1831 Male, age 72, unknown 65.0
1840 Male, age 53, unknown 64.4
2464 Female, age 72, unknown 62.9
Periaquaductal grey, lateral
nTPM: 65.7
2053 Male, age 18, unknown 66.7
2140 Male, age 76, both hemispheres 66.3
2272 Male, age 74, both hemispheres 64.0
Pretectal area
nTPM: 66.1
1817 Female, age 42, unknown 69.2
1815 Male, age 53, unknown 67.9
2224 Female, age 72, unknown 67.9
1816 Male, age 51, unknown 67.1
2273 Male, age 74, both hemispheres 66.4
2007 Male, age 72, unknown 66.3
2667 Female, age 75, unknown 66.3
2825 Male, age 18, unknown 65.6
1944 Female, age 72, unknown 65.2
2407 Male, age 75, both hemispheres 63.6
2316 Male, age 76, right hemisphere 61.7
Red nucleus
nTPM: 65.7
1821 Female, age 72, unknown 69.9
2725 Female, age 75, unknown 68.6
2503 Female, age 72, unknown 68.3
2769 Male, age 72, unknown 66.4
1904 Male, age 53, unknown 65.9
2588 Male, age 74, left hemisphere 65.5
2823 Male, age 76, right hemisphere 65.1
2785 Male, age 18, unknown 64.8
2227 Male, age 72, unknown 64.0
1954 Female, age 42, unknown 63.8
1865 Male, age 51, unknown 63.5
2584 Male, age 75, left hemisphere 63.0
Substantia nigra
nTPM: 67.9
1916 Female, age 42, unknown 80.4
2699 Male, age 18, unknown 75.4
1851 Male, age 51, unknown 73.1
2665 Male, age 74, both hemispheres 68.7
1889 Female, age 72, unknown 66.8
2583 Male, age 75, right hemisphere 66.4
2241 Male, age 72, unknown 65.0
1941 Male, age 53, unknown 64.1
2590 Female, age 75, unknown 61.5
2409 Female, age 72, unknown 57.5
Superior colliculus
nTPM: 64.8
1796 Male, age 53, unknown 67.9
2668 Female, age 75, unknown 67.4
2261 Male, age 18, unknown 66.7
1995 Male, age 72, unknown 65.4
2587 Male, age 74, left hemisphere 65.2
2664 Male, age 75, both hemispheres 64.5
1913 Female, age 42, unknown 63.9
2087 Female, age 72, unknown 63.8
1895 Male, age 76, right hemisphere 61.6
1839 Male, age 51, unknown 61.2
Ventral tegmental area
nTPM: 68.8
1915 Female, age 42, unknown 72.1
2218 Male, age 76, both hemispheres 70.0
2021 Male, age 53, unknown 68.4
2410 Female, age 72, unknown 68.0
1942 Male, age 51, unknown 67.4
2223 Female, age 72, unknown 67.1

MIDBRAIN - GTEx RNA-seqi
Average nTPM 72.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 72.2
Samples: 139

Max nTPM: 133.5
Min nTPM: 23.5
Std nTPM: 20.3
Median nTPM: 69.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 133.5
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 125.7
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 125.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 123.8
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 121.5
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 116.2
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 109.3
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 108.7
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 107.0
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 106.7
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 105.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 40.8
FF:10158-103A5 76 years, female 40.8

MIDBRAIN - Mouse RNA-seqi
Average nTPM 15.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 15.4
Samples: 4

Max nTPM: 17.8
Min nTPM: 14.4
Sample A Male 17.8
Sample B Male 14.4
Sample C Female 14.8
Sample D Female 14.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.