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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:57.0 nTPM
HPA:57.0 nTPM
GTEx:28.1 nTPM
FANTOM5:55.5 Scaled Tags Per Million
Pig:61.0 nTPM
Mouse:104.3 nTPM
Allen mouse:4.7 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 57.0
Sample id Sample description nTPM
Amygdala
nTPM: 57.0
2695 Female, age 67, right hemisphere 60.3
2514 Male, age 75, right hemisphere 57.6
2814 Male, age 76, right hemisphere 57.3
2517 Female, age 94, left hemisphere 55.3
1987 Female, age 91, left hemisphere 54.2
Basal amygdala
nTPM: 56.1
1955 Male, age 76, both hemispheres 57.8
2685 Female, age 94, left hemisphere 56.4
2110 Male, age 80, left hemisphere 56.2
2243 Female, age 91, right hemisphere 55.6
2609 Male, age 75, right hemisphere 55.2
2827 Female, age 67, right hemisphere 55.2
Central amygdala
nTPM: 56.4
2826 Female, age 94, left hemisphere 59.8
1905 Male, age 76, both hemispheres 56.8
2701 Female, age 91, right hemisphere 55.5
2239 Male, age 80, left hemisphere 55.3
2515 Male, age 75, right hemisphere 54.4
Corticomedial amygdala
nTPM: 56.6
2240 Male, age 76, both hemispheres 58.4
2429 Female, age 94, left hemisphere 58.3
2829 Male, age 80, left hemisphere 56.8
2428 Male, age 75, right hemisphere 56.4
2535 Female, age 67, right hemisphere 55.2
2242 Female, age 91, right hemisphere 54.4
Lateral amygdala
nTPM: 56.6
2534 Female, age 94, left hemisphere 59.7
1883 Male, age 76, both hemispheres 58.7
2830 Female, age 67, right hemisphere 57.7
2516 Male, age 75, right hemisphere 57.4
2256 Male, age 80, left hemisphere 53.6
2255 Female, age 91, right hemisphere 52.5
Stria terminalis, bed nucleus
nTPM: 56.2
1974 Female, age 91, both hemispheres 57.5
2486 Female, age 94, both hemispheres 57.3
2201 Male, age 74, unknown 53.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 28.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 28.1
Samples: 152

Max nTPM: 71.8
Min nTPM: 15.5
Std nTPM: 7.3
Median nTPM: 27.2
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 71.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 61.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 47.7
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 45.6
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 41.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 40.9
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 40.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 39.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 39.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 38.5
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 38.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 55.5
FF:10151-102I7 76 years, female 55.5

AMYGDALA - Pig RNA-seqi
Average nTPM 61.0
Pig sample Sample description nTPM
Amygdala
nTPM: 61.0
Samples: 4

Max nTPM: 76.5
Min nTPM: 45.8
Sample A Female 76.5
Sample B Female 60.1
Sample C Male 61.5
Sample D Male 45.8

AMYGDALA - Mouse RNA-seqi
Average nTPM 104.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 104.3
Samples: 4

Max nTPM: 113.0
Min nTPM: 93.9
Sample A Male 93.9
Sample B Male 113.0
Sample C Female 108.9
Sample D Female 101.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.7
68301270 Antisense, RP_041129_02_H11, Mouse strain C57BL/6J (56 days, male) 6.0
73512483 Antisense, RP_051017_02_D02, Mouse strain C57BL/6J (56 days, male) 3.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.