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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:61.5 nTPM
HPA:61.5 nTPM
GTEx:31.2 nTPM
FANTOM5:48.0 Scaled Tags Per Million
Pig:73.3 nTPM
Mouse:98.9 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049270
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.5
Sample id Sample description nTPM
Hippocampus
nTPM: 60.3
1898 Male, age 80, left hemisphere 65.4
1855 Male, age 76, left hemisphere 64.1
2529 Female, age 94, left hemisphere 60.0
1911 Female, age 85, right hemisphere 59.2
2621 Female, age 67, right hemisphere 58.0
2148 Female, age 91, left hemisphere 54.8
Dentate gyrus
nTPM: 58.5
1927 Female, age 91, both hemispheres 63.4
2010 Male, age 76, both hemispheres 62.0
2530 Female, age 94, left hemisphere 61.9
2246 Female, age 85, both hemispheres 58.5
2531 Female, age 67, both hemispheres 54.0
2528 Male, age 74, both hemispheres 51.7
Entorhinal gyrus
nTPM: 58.7
1938 Female, age 85, left hemisphere 62.9
1787 Male, age 76, left hemisphere 61.5
2764 Male, age 80, right hemisphere 59.1
2613 Female, age 94, left hemisphere 58.7
2686 Male, age 75, right hemisphere 56.3
2117 Female, age 91, right hemisphere 53.8
Hippocampus, CA1
nTPM: 61.5
2749 Male, age 80, left hemisphere 76.3
1873 Female, age 85, both hemispheres 60.4
2045 Male, age 76, both hemispheres 58.2
2527 Male, age 74, both hemispheres 57.7
2082 Female, age 91, right hemisphere 55.1
Hippocampus, CA2
nTPM: 61.1
1892 Male, age 76, both hemispheres 73.5
1963 Male, age 80, left hemisphere 64.0
2249 Male, age 74, both hemispheres 59.3
2437 Female, age 94, left hemisphere 57.9
1940 Female, age 85, left hemisphere 57.7
2113 Female, age 91, right hemisphere 54.2
Hippocampus, CA3
nTPM: 60.0
2137 Male, age 80, left hemisphere 73.1
1867 Male, age 76, both hemispheres 66.3
1891 Female, age 85, both hemispheres 59.0
2436 Male, age 74, both hemispheres 57.1
2861 Female, age 67, both hemispheres 52.9
2620 Female, age 94, left hemisphere 51.6
Parahippocampal cortex
nTPM: 59.2
1850 Male, age 80, both hemispheres 62.5
2018 Male, age 76, both hemispheres 62.3
2245 Female, age 91, both hemispheres 61.8
1933 Female, age 85, both hemispheres 61.0
2532 Female, age 72, left hemisphere 59.9
1990 Female, age 91, right hemisphere 59.6
2250 Female, age 67, right hemisphere 59.2
2693 Female, age 94, both hemispheres 57.5
2692 Male, age 74, both hemispheres 55.9
2622 Female, age 67, right hemisphere 52.7
Perirhinal gyrus
nTPM: 61.2
1847 Female, age 91, left hemisphere 64.3
1841 Female, age 85, right hemisphere 63.0
2848 Male, age 76, right hemisphere 60.1
1794 Male, age 80, right hemisphere 59.5
2521 Female, age 94, right hemisphere 59.1
Subiculum
nTPM: 59.0
1901 Male, age 80, both hemispheres 64.8
2438 Female, age 94, left hemisphere 63.5
2042 Male, age 76, both hemispheres 61.0
1977 Female, age 85, both hemispheres 58.9
2619 Male, age 74, both hemispheres 53.1
2729 Female, age 91, right hemisphere 52.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.2
Samples: 197

Max nTPM: 68.8
Min nTPM: 12.5
Std nTPM: 9.4
Median nTPM: 30.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 68.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 62.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 57.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 54.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 53.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 51.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 51.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 50.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 50.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 47.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.0
FF:10169-103B7 60 years, female 48.1
FF:10153-102I9 76 years, female 48.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.7
Samples: 4

Max nTPM: 69.4
Min nTPM: 45.4
Sample A Female 65.6
Sample B Female 50.5
Sample C Male 69.4
Sample D Male 45.4
Entorhinal cortex
nTPM: 73.3
Samples: 4

Max nTPM: 77.9
Min nTPM: 68.6
Sample A Female 69.1
Sample B Female 77.6
Sample C Male 77.9
Sample D Male 68.6
Subiculum
nTPM: 66.4
Samples: 4

Max nTPM: 80.3
Min nTPM: 60.2
Sample A Female 80.3
Sample B Female 60.2
Sample C Male 60.5
Sample D Male 64.5
Ventral hippocampus
nTPM: 47.3
Samples: 4

Max nTPM: 53.0
Min nTPM: 42.0
Sample A Female 47.8
Sample B Female 46.2
Sample C Male 42.0
Sample D Male 53.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.1
Samples: 4

Max nTPM: 100.2
Min nTPM: 84.6
Sample A Male 84.6
Sample B Male 100.2
Sample C Female 96.8
Sample D Female 98.6
Hippocampal formation
nTPM: 98.9
Samples: 4

Max nTPM: 114.2
Min nTPM: 92.7
Sample A Male 114.2
Sample B Male 94.3
Sample C Female 94.4
Sample D Female 92.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
73512483 Antisense, RP_051017_02_D02, Mouse strain C57BL/6J (56 days, male) 4.6
68301270 Antisense, RP_041129_02_H11, Mouse strain C57BL/6J (56 days, male) 4.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.