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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:109.4 nTPM
HPA:109.4 nTPM
GTEx:100.1 nTPM
FANTOM5:101.5 Scaled Tags Per Million
Pig:13.1 nTPM
Mouse:35.1 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035376Antibody HPA035377
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.4
Sample id Sample description nTPM
Hippocampus
nTPM: 107.7
1898 Male, age 80, left hemisphere 114.6
2529 Female, age 94, left hemisphere 108.2
2621 Female, age 67, right hemisphere 108.1
1855 Male, age 76, left hemisphere 107.3
1911 Female, age 85, right hemisphere 106.3
2148 Female, age 91, left hemisphere 102.1
Dentate gyrus
nTPM: 107.1
2530 Female, age 94, left hemisphere 118.1
2528 Male, age 74, both hemispheres 110.1
2010 Male, age 76, both hemispheres 108.9
1927 Female, age 91, both hemispheres 105.1
2246 Female, age 85, both hemispheres 103.7
2531 Female, age 67, both hemispheres 96.8
Entorhinal gyrus
nTPM: 106.5
2764 Male, age 80, right hemisphere 110.8
2117 Female, age 91, right hemisphere 110.2
1938 Female, age 85, left hemisphere 109.9
1787 Male, age 76, left hemisphere 105.2
2613 Female, age 94, left hemisphere 103.9
2686 Male, age 75, right hemisphere 99.3
Hippocampus, CA1
nTPM: 107.9
2749 Male, age 80, left hemisphere 118.3
2527 Male, age 74, both hemispheres 108.7
1873 Female, age 85, both hemispheres 104.6
2082 Female, age 91, right hemisphere 104.6
2045 Male, age 76, both hemispheres 103.1
Hippocampus, CA2
nTPM: 109.4
1963 Male, age 80, left hemisphere 115.9
2249 Male, age 74, both hemispheres 114.0
2437 Female, age 94, left hemisphere 109.4
1892 Male, age 76, both hemispheres 108.9
2113 Female, age 91, right hemisphere 104.4
1940 Female, age 85, left hemisphere 103.6
Hippocampus, CA3
nTPM: 106.0
2436 Male, age 74, both hemispheres 112.2
2137 Male, age 80, left hemisphere 110.5
1891 Female, age 85, both hemispheres 106.4
1867 Male, age 76, both hemispheres 105.5
2620 Female, age 94, left hemisphere 102.2
2861 Female, age 67, both hemispheres 99.2
Parahippocampal cortex
nTPM: 103.8
1850 Male, age 80, both hemispheres 109.2
2532 Female, age 72, left hemisphere 106.8
1990 Female, age 91, right hemisphere 105.8
1933 Female, age 85, both hemispheres 105.2
2250 Female, age 67, right hemisphere 104.7
2018 Male, age 76, both hemispheres 104.3
2245 Female, age 91, both hemispheres 103.9
2692 Male, age 74, both hemispheres 103.4
2622 Female, age 67, right hemisphere 97.6
2693 Female, age 94, both hemispheres 97.3
Perirhinal gyrus
nTPM: 106.9
1847 Female, age 91, left hemisphere 111.1
1794 Male, age 80, right hemisphere 110.0
2521 Female, age 94, right hemisphere 106.8
1841 Female, age 85, right hemisphere 106.7
2848 Male, age 76, right hemisphere 100.1
Subiculum
nTPM: 106.1
1901 Male, age 80, both hemispheres 111.5
1977 Female, age 85, both hemispheres 109.9
2619 Male, age 74, both hemispheres 106.0
2042 Male, age 76, both hemispheres 104.9
2729 Female, age 91, right hemisphere 103.3
2438 Female, age 94, left hemisphere 101.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 100.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.1
Samples: 197

Max nTPM: 207.0
Min nTPM: 35.7
Std nTPM: 26.6
Median nTPM: 97.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 207.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 192.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 191.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 182.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 155.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 155.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 152.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 148.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 147.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 146.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 142.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.5
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 74.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 17.4
Min nTPM: 9.7
Sample A Female 17.4
Sample B Female 11.8
Sample C Male 13.6
Sample D Male 9.7
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 11.2
Min nTPM: 8.1
Sample A Female 9.9
Sample B Female 11.1
Sample C Male 11.2
Sample D Male 8.1
Subiculum
nTPM: 10.7
Samples: 4

Max nTPM: 13.4
Min nTPM: 9.1
Sample A Female 13.4
Sample B Female 10.9
Sample C Male 9.1
Sample D Male 9.4
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.5
Sample A Female 13.2
Sample B Female 9.5
Sample C Male 13.6
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.1
Samples: 4

Max nTPM: 41.9
Min nTPM: 31.9
Sample A Male 32.2
Sample B Male 34.3
Sample C Female 41.9
Sample D Female 31.9
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 37.0
Min nTPM: 30.4
Sample A Male 37.0
Sample B Male 31.0
Sample C Female 30.4
Sample D Female 33.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68545723 Antisense, RP_050120_01_D11, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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