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NDUFAF3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:116.5 nTPM
HPA:116.5 nTPM
GTEx:111.0 nTPM
FANTOM5:105.7 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:25.5 nTPM
Allen mouse:0.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 116.5
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 113.0
2019 Male, age 18, unknown 121.6
2411 Female, age 72, unknown 115.7
2828 Female, age 72, unknown 115.3
1870 Female, age 42, unknown 114.6
1830 Male, age 51, unknown 112.9
1833 Male, age 53, unknown 112.8
2666 Male, age 74, left hemisphere 112.2
2586 Male, age 75, left hemisphere 111.1
1827 Male, age 72, unknown 111.0
2219 Male, age 76, both hemispheres 102.7
Dorsal raphe nucleus
nTPM: 113.9
2298 Female, age 72, unknown 116.8
2750 Male, age 76, both hemispheres 116.1
2047 Male, age 72, unknown 114.9
1828 Male, age 53, unknown 112.7
2016 Female, age 72, unknown 109.0
Inferior colliculus
nTPM: 110.4
2097 Female, age 72, unknown 114.8
1848 Female, age 42, unknown 110.0
1890 Male, age 53, unknown 109.4
2849 Male, age 72, unknown 107.4
Median raphe nucleus
nTPM: 110.0
2220 Male, age 76, midline 110.0
Pedunculopontine tegmental nucleus
nTPM: 112.4
2334 Male, age 80, both hemispheres 115.9
1921 Female, age 85, both hemispheres 110.9
2338 Male, age 61, both hemispheres 110.4
Periaquaductal grey, anterior
nTPM: 110.6
1947 Male, age 18, unknown 112.4
2502 Female, age 75, unknown 110.6
1795 Male, age 51, unknown 108.7
Periaquaductal grey, dorsal
nTPM: 107.5
2850 Male, age 76, both hemispheres 108.5
1840 Male, age 53, unknown 107.9
2464 Female, age 72, unknown 106.9
1831 Male, age 72, unknown 106.8
Periaquaductal grey, lateral
nTPM: 111.2
2272 Male, age 74, both hemispheres 114.1
2053 Male, age 18, unknown 109.7
2140 Male, age 76, both hemispheres 109.7
Pretectal area
nTPM: 112.9
2007 Male, age 72, unknown 119.0
1817 Female, age 42, unknown 118.3
2273 Male, age 74, both hemispheres 116.5
1944 Female, age 72, unknown 115.5
1815 Male, age 53, unknown 113.5
1816 Male, age 51, unknown 113.2
2667 Female, age 75, unknown 109.7
2224 Female, age 72, unknown 109.4
2316 Male, age 76, right hemisphere 109.4
2825 Male, age 18, unknown 109.2
2407 Male, age 75, both hemispheres 108.3
Red nucleus
nTPM: 116.5
2785 Male, age 18, unknown 121.9
1954 Female, age 42, unknown 120.1
2227 Male, age 72, unknown 118.9
2769 Male, age 72, unknown 118.7
1821 Female, age 72, unknown 118.4
1865 Male, age 51, unknown 117.9
1904 Male, age 53, unknown 117.2
2503 Female, age 72, unknown 116.8
2588 Male, age 74, left hemisphere 112.4
2584 Male, age 75, left hemisphere 112.1
2823 Male, age 76, right hemisphere 112.1
2725 Female, age 75, unknown 111.8
Substantia nigra
nTPM: 112.9
1889 Female, age 72, unknown 119.6
1941 Male, age 53, unknown 116.5
1851 Male, age 51, unknown 116.4
2583 Male, age 75, right hemisphere 115.8
1916 Female, age 42, unknown 113.8
2590 Female, age 75, unknown 112.9
2665 Male, age 74, both hemispheres 109.8
2409 Female, age 72, unknown 109.7
2699 Male, age 18, unknown 108.3
2241 Male, age 72, unknown 106.2
Superior colliculus
nTPM: 112.6
2668 Female, age 75, unknown 120.5
2587 Male, age 74, left hemisphere 115.1
1913 Female, age 42, unknown 114.8
1995 Male, age 72, unknown 114.4
1796 Male, age 53, unknown 112.6
2087 Female, age 72, unknown 112.0
1839 Male, age 51, unknown 111.2
1895 Male, age 76, right hemisphere 109.5
2664 Male, age 75, both hemispheres 108.1
2261 Male, age 18, unknown 107.9
Ventral tegmental area
nTPM: 112.7
2410 Female, age 72, unknown 118.9
2223 Female, age 72, unknown 114.8
1915 Female, age 42, unknown 112.1
2218 Male, age 76, both hemispheres 111.2
1942 Male, age 51, unknown 110.4
2021 Male, age 53, unknown 109.0

MIDBRAIN - GTEx RNA-seqi
Average nTPM 111.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 111.0
Samples: 139

Max nTPM: 185.8
Min nTPM: 38.3
Std nTPM: 25.3
Median nTPM: 110.6
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 185.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT 60-69 years, male 179.8
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 178.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 174.1
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 168.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 167.1
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 160.8
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 156.5
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 155.7
GTEX-13OW8-0011-R2a-SM-5L3G2 60-69 years, male 155.2
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 151.2
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 105.7
FF:10158-103A5 76 years, female 105.7

MIDBRAIN - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Midbrain
nTPM: 15.6
Samples: 4

Max nTPM: 24.1
Min nTPM: 11.4
Sample A Female 24.1
Sample B Female 15.0
Sample C Male 11.9
Sample D Male 11.4
Periaqueductal gray
nTPM: 13.8
Samples: 3

Max nTPM: 14.7
Min nTPM: 12.8
Sample B Female 14.7
Sample C Male 13.9
Sample D Male 12.8
Substantia nigra
nTPM: 15.5
Samples: 4

Max nTPM: 18.7
Min nTPM: 13.7
Sample A Female 18.7
Sample B Female 14.9
Sample C Male 13.7
Sample D Male 14.8
Superior colliculi
nTPM: 15.8
Samples: 4

Max nTPM: 18.5
Min nTPM: 13.3
Sample A Female 18.5
Sample B Female 16.8
Sample C Male 14.5
Sample D Male 13.3

MIDBRAIN - Mouse RNA-seqi
Average nTPM 25.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 25.5
Samples: 4

Max nTPM: 29.5
Min nTPM: 22.0
Sample A Male 29.5
Sample B Male 22.0
Sample C Female 26.3
Sample D Female 24.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.2
68545723 Antisense, RP_050120_01_D11, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.