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PDE4DIP
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:115.5 nTPM
HPA:115.5 nTPM
GTEx:57.8 nTPM
FANTOM5:19.5 Scaled Tags Per Million
Pig:72.8 nTPM
Mouse:51.0 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 115.5
Sample id Sample description nTPM
Hippocampus
nTPM: 86.5
2148 Female, age 91, left hemisphere 114.6
2529 Female, age 94, left hemisphere 100.3
1911 Female, age 85, right hemisphere 88.9
1855 Male, age 76, left hemisphere 77.2
1898 Male, age 80, left hemisphere 70.1
2621 Female, age 67, right hemisphere 68.2
Dentate gyrus
nTPM: 83.9
2528 Male, age 74, both hemispheres 95.2
2246 Female, age 85, both hemispheres 94.1
2010 Male, age 76, both hemispheres 92.7
2531 Female, age 67, both hemispheres 84.4
1927 Female, age 91, both hemispheres 75.4
2530 Female, age 94, left hemisphere 61.6
Entorhinal gyrus
nTPM: 72.5
2764 Male, age 80, right hemisphere 75.3
2613 Female, age 94, left hemisphere 74.3
2117 Female, age 91, right hemisphere 74.1
2686 Male, age 75, right hemisphere 72.8
1938 Female, age 85, left hemisphere 71.3
1787 Male, age 76, left hemisphere 67.2
Hippocampus, CA1
nTPM: 115.5
2045 Male, age 76, both hemispheres 149.2
2749 Male, age 80, left hemisphere 141.7
2527 Male, age 74, both hemispheres 99.9
1873 Female, age 85, both hemispheres 98.7
2082 Female, age 91, right hemisphere 88.0
Hippocampus, CA2
nTPM: 80.2
1940 Female, age 85, left hemisphere 107.2
2113 Female, age 91, right hemisphere 81.3
2249 Male, age 74, both hemispheres 80.0
1892 Male, age 76, both hemispheres 76.3
1963 Male, age 80, left hemisphere 74.0
2437 Female, age 94, left hemisphere 62.2
Hippocampus, CA3
nTPM: 87.0
2137 Male, age 80, left hemisphere 108.1
2620 Female, age 94, left hemisphere 95.5
1867 Male, age 76, both hemispheres 88.9
1891 Female, age 85, both hemispheres 88.7
2861 Female, age 67, both hemispheres 79.8
2436 Male, age 74, both hemispheres 60.8
Parahippocampal cortex
nTPM: 76.9
2622 Female, age 67, right hemisphere 97.3
2692 Male, age 74, both hemispheres 88.7
1933 Female, age 85, both hemispheres 87.4
2693 Female, age 94, both hemispheres 82.8
2250 Female, age 67, right hemisphere 75.6
2245 Female, age 91, both hemispheres 73.1
1850 Male, age 80, both hemispheres 70.2
2532 Female, age 72, left hemisphere 68.5
2018 Male, age 76, both hemispheres 62.8
1990 Female, age 91, right hemisphere 62.6
Perirhinal gyrus
nTPM: 85.0
2521 Female, age 94, right hemisphere 111.5
1841 Female, age 85, right hemisphere 80.8
2848 Male, age 76, right hemisphere 79.5
1847 Female, age 91, left hemisphere 77.2
1794 Male, age 80, right hemisphere 76.0
Subiculum
nTPM: 78.4
2729 Female, age 91, right hemisphere 105.0
2619 Male, age 74, both hemispheres 94.8
1977 Female, age 85, both hemispheres 73.9
1901 Male, age 80, both hemispheres 69.7
2438 Female, age 94, left hemisphere 66.9
2042 Male, age 76, both hemispheres 60.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.8
Samples: 197

Max nTPM: 105.9
Min nTPM: 29.3
Std nTPM: 11.9
Median nTPM: 56.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 105.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 105.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 88.5
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 87.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 86.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 86.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 84.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 83.7
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 83.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 80.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 80.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.5
FF:10153-102I9 76 years, female 21.3
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 71.2
Samples: 4

Max nTPM: 81.1
Min nTPM: 64.5
Sample A Female 81.1
Sample B Female 73.3
Sample C Male 66.0
Sample D Male 64.5
Entorhinal cortex
nTPM: 72.8
Samples: 4

Max nTPM: 76.8
Min nTPM: 70.7
Sample A Female 76.8
Sample B Female 72.4
Sample C Male 70.7
Sample D Male 71.2
Subiculum
nTPM: 59.7
Samples: 4

Max nTPM: 74.2
Min nTPM: 53.9
Sample A Female 74.2
Sample B Female 56.4
Sample C Male 53.9
Sample D Male 54.2
Ventral hippocampus
nTPM: 62.2
Samples: 4

Max nTPM: 73.6
Min nTPM: 52.5
Sample A Female 61.7
Sample B Female 52.5
Sample C Male 60.9
Sample D Male 73.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.3
Samples: 4

Max nTPM: 52.5
Min nTPM: 45.4
Sample A Male 46.9
Sample B Male 48.5
Sample C Female 45.4
Sample D Female 52.5
Hippocampal formation
nTPM: 51.0
Samples: 4

Max nTPM: 57.7
Min nTPM: 44.1
Sample A Male 44.1
Sample B Male 54.5
Sample C Female 57.7
Sample D Female 47.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
1994 Antisense, RP_Baylor_103380, Mouse strain C57BL/6J (56 days, male) 7.2
69012795 Antisense, RP_050309_01_E04, Mouse strain C57BL/6J (56 days, male) 6.0
1995 Antisense, RP_Baylor_103380, Mouse strain C57BL/6J (56 days, male) 5.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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