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SNX18
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:10.3 nTPM
HPA:10.3 nTPM
GTEx:7.4 nTPM
FANTOM5:18.3 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:7.4 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037800
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.3
Sample id Sample description nTPM
Hippocampus
nTPM: 10.3
2529 Female, age 94, left hemisphere 12.4
2148 Female, age 91, left hemisphere 11.0
2621 Female, age 67, right hemisphere 10.4
1911 Female, age 85, right hemisphere 10.2
1855 Male, age 76, left hemisphere 9.0
1898 Male, age 80, left hemisphere 8.6
Dentate gyrus
nTPM: 9.6
2530 Female, age 94, left hemisphere 12.0
2528 Male, age 74, both hemispheres 10.4
2531 Female, age 67, both hemispheres 10.1
2010 Male, age 76, both hemispheres 9.6
2246 Female, age 85, both hemispheres 8.1
1927 Female, age 91, both hemispheres 7.3
Entorhinal gyrus
nTPM: 8.7
2117 Female, age 91, right hemisphere 12.7
2764 Male, age 80, right hemisphere 9.7
1787 Male, age 76, left hemisphere 8.8
2613 Female, age 94, left hemisphere 7.6
1938 Female, age 85, left hemisphere 6.8
2686 Male, age 75, right hemisphere 6.7
Hippocampus, CA1
nTPM: 9.0
2527 Male, age 74, both hemispheres 10.6
2045 Male, age 76, both hemispheres 9.4
1873 Female, age 85, both hemispheres 9.1
2082 Female, age 91, right hemisphere 8.5
2749 Male, age 80, left hemisphere 7.4
Hippocampus, CA2
nTPM: 9.0
2249 Male, age 74, both hemispheres 10.4
1963 Male, age 80, left hemisphere 10.3
2113 Female, age 91, right hemisphere 9.6
1940 Female, age 85, left hemisphere 9.1
2437 Female, age 94, left hemisphere 8.3
1892 Male, age 76, both hemispheres 6.4
Hippocampus, CA3
nTPM: 8.6
2620 Female, age 94, left hemisphere 11.4
2861 Female, age 67, both hemispheres 10.1
1891 Female, age 85, both hemispheres 8.5
1867 Male, age 76, both hemispheres 7.3
2436 Male, age 74, both hemispheres 7.2
2137 Male, age 80, left hemisphere 7.0
Parahippocampal cortex
nTPM: 7.6
2018 Male, age 76, both hemispheres 12.7
2245 Female, age 91, both hemispheres 8.7
2532 Female, age 72, left hemisphere 8.6
2692 Male, age 74, both hemispheres 7.9
1990 Female, age 91, right hemisphere 7.4
2250 Female, age 67, right hemisphere 7.1
1933 Female, age 85, both hemispheres 6.7
2622 Female, age 67, right hemisphere 6.2
1850 Male, age 80, both hemispheres 5.7
2693 Female, age 94, both hemispheres 4.7
Perirhinal gyrus
nTPM: 5.6
1794 Male, age 80, right hemisphere 6.4
2521 Female, age 94, right hemisphere 6.1
2848 Male, age 76, right hemisphere 6.1
1841 Female, age 85, right hemisphere 4.7
1847 Female, age 91, left hemisphere 4.6
Subiculum
nTPM: 9.5
2042 Male, age 76, both hemispheres 13.0
2729 Female, age 91, right hemisphere 11.5
2619 Male, age 74, both hemispheres 9.6
1901 Male, age 80, both hemispheres 8.5
1977 Female, age 85, both hemispheres 8.1
2438 Female, age 94, left hemisphere 6.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.4
Samples: 197

Max nTPM: 14.9
Min nTPM: 3.0
Std nTPM: 2.2
Median nTPM: 7.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 14.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 13.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 13.5
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 12.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 12.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 12.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 12.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 12.1
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 12.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 11.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 11.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.3
FF:10153-102I9 76 years, female 26.3
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 18.1
Min nTPM: 10.7
Sample A Female 18.1
Sample B Female 10.9
Sample C Male 17.2
Sample D Male 10.7
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.5
Sample A Female 10.3
Sample B Female 9.6
Sample C Male 10.6
Sample D Male 8.5
Subiculum
nTPM: 11.5
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.2
Sample A Female 13.6
Sample B Female 10.6
Sample C Male 10.2
Sample D Male 11.4
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 14.0
Min nTPM: 9.7
Sample A Female 12.4
Sample B Female 9.7
Sample C Male 14.0
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.5
Sample A Male 7.3
Sample B Male 7.0
Sample C Female 5.5
Sample D Female 7.7
Hippocampal formation
nTPM: 7.4
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.8
Sample A Male 5.8
Sample B Male 7.9
Sample C Female 7.5
Sample D Female 8.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
76081036 Antisense, RP_060608_03_D08, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

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