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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:33.4 nTPM
HPA:33.4 nTPM
GTEx:35.3 nTPM
FANTOM5:51.1 Scaled Tags Per Million
Pig:32.4 nTPM
Mouse:24.5 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001911
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.4
Sample id Sample description nTPM
Hippocampus
nTPM: 26.9
1898 Male, age 80, left hemisphere 31.1
2621 Female, age 67, right hemisphere 28.8
1855 Male, age 76, left hemisphere 27.6
2148 Female, age 91, left hemisphere 25.7
2529 Female, age 94, left hemisphere 25.1
1911 Female, age 85, right hemisphere 23.1
Dentate gyrus
nTPM: 28.1
2530 Female, age 94, left hemisphere 34.6
1927 Female, age 91, both hemispheres 28.4
2531 Female, age 67, both hemispheres 27.5
2246 Female, age 85, both hemispheres 26.8
2010 Male, age 76, both hemispheres 26.7
2528 Male, age 74, both hemispheres 24.9
Entorhinal gyrus
nTPM: 30.4
2613 Female, age 94, left hemisphere 36.5
2764 Male, age 80, right hemisphere 34.6
1787 Male, age 76, left hemisphere 30.6
1938 Female, age 85, left hemisphere 30.5
2686 Male, age 75, right hemisphere 26.8
2117 Female, age 91, right hemisphere 23.6
Hippocampus, CA1
nTPM: 28.0
2749 Male, age 80, left hemisphere 33.6
1873 Female, age 85, both hemispheres 29.5
2045 Male, age 76, both hemispheres 26.4
2527 Male, age 74, both hemispheres 26.1
2082 Female, age 91, right hemisphere 24.3
Hippocampus, CA2
nTPM: 27.2
1892 Male, age 76, both hemispheres 32.1
2437 Female, age 94, left hemisphere 30.9
1963 Male, age 80, left hemisphere 27.3
1940 Female, age 85, left hemisphere 24.8
2113 Female, age 91, right hemisphere 24.2
2249 Male, age 74, both hemispheres 23.9
Hippocampus, CA3
nTPM: 27.2
2861 Female, age 67, both hemispheres 30.3
2620 Female, age 94, left hemisphere 29.0
2137 Male, age 80, left hemisphere 27.9
1867 Male, age 76, both hemispheres 27.2
2436 Male, age 74, both hemispheres 25.3
1891 Female, age 85, both hemispheres 23.5
Parahippocampal cortex
nTPM: 29.5
1850 Male, age 80, both hemispheres 32.4
2245 Female, age 91, both hemispheres 31.1
2532 Female, age 72, left hemisphere 30.9
2622 Female, age 67, right hemisphere 30.3
1933 Female, age 85, both hemispheres 30.2
2250 Female, age 67, right hemisphere 29.8
1990 Female, age 91, right hemisphere 28.9
2693 Female, age 94, both hemispheres 28.0
2692 Male, age 74, both hemispheres 27.6
2018 Male, age 76, both hemispheres 25.9
Perirhinal gyrus
nTPM: 33.4
1847 Female, age 91, left hemisphere 37.4
1794 Male, age 80, right hemisphere 34.9
1841 Female, age 85, right hemisphere 34.1
2848 Male, age 76, right hemisphere 30.4
2521 Female, age 94, right hemisphere 30.3
Subiculum
nTPM: 25.9
2619 Male, age 74, both hemispheres 29.3
1977 Female, age 85, both hemispheres 29.1
1901 Male, age 80, both hemispheres 27.1
2438 Female, age 94, left hemisphere 23.9
2042 Male, age 76, both hemispheres 23.4
2729 Female, age 91, right hemisphere 22.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.3
Samples: 197

Max nTPM: 63.4
Min nTPM: 15.3
Std nTPM: 10.2
Median nTPM: 33.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 63.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 62.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 59.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 58.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 57.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 57.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 57.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 56.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 56.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 55.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 54.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.1
FF:10169-103B7 60 years, female 52.3
FF:10153-102I9 76 years, female 49.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 42.5
Min nTPM: 23.5
Sample A Female 42.5
Sample B Female 31.5
Sample C Male 31.0
Sample D Male 23.5
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 34.3
Min nTPM: 24.3
Sample A Female 34.3
Sample B Female 30.2
Sample C Male 28.0
Sample D Male 24.3
Subiculum
nTPM: 30.5
Samples: 4

Max nTPM: 38.8
Min nTPM: 25.8
Sample A Female 38.8
Sample B Female 27.3
Sample C Male 30.2
Sample D Male 25.8
Ventral hippocampus
nTPM: 32.4
Samples: 4

Max nTPM: 40.1
Min nTPM: 20.4
Sample A Female 35.5
Sample B Female 20.4
Sample C Male 40.1
Sample D Male 33.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.2
Samples: 4

Max nTPM: 21.0
Min nTPM: 17.8
Sample A Male 17.8
Sample B Male 21.0
Sample C Female 19.5
Sample D Female 18.4
Hippocampal formation
nTPM: 24.5
Samples: 4

Max nTPM: 27.3
Min nTPM: 21.4
Sample A Male 24.8
Sample B Male 21.4
Sample C Female 24.4
Sample D Female 27.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
74357743 Antisense, RP_051219_04_A02, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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