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PTPN11
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:66.1 nTPM
HPA:66.1 nTPM
GTEx:73.4 nTPM
FANTOM5:60.8 Scaled Tags Per Million
Pig:48.4 nTPM
Mouse:64.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005377
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.1
Sample id Sample description nTPM
Hippocampus
nTPM: 63.2
1911 Female, age 85, right hemisphere 71.3
2529 Female, age 94, left hemisphere 69.8
1898 Male, age 80, left hemisphere 62.2
2148 Female, age 91, left hemisphere 60.8
1855 Male, age 76, left hemisphere 58.4
2621 Female, age 67, right hemisphere 56.5
Dentate gyrus
nTPM: 62.9
2530 Female, age 94, left hemisphere 80.5
1927 Female, age 91, both hemispheres 62.9
2246 Female, age 85, both hemispheres 59.3
2531 Female, age 67, both hemispheres 59.0
2010 Male, age 76, both hemispheres 58.9
2528 Male, age 74, both hemispheres 56.7
Entorhinal gyrus
nTPM: 63.9
2686 Male, age 75, right hemisphere 75.4
1938 Female, age 85, left hemisphere 67.7
2117 Female, age 91, right hemisphere 65.0
2613 Female, age 94, left hemisphere 60.3
1787 Male, age 76, left hemisphere 59.9
2764 Male, age 80, right hemisphere 55.2
Hippocampus, CA1
nTPM: 58.7
2749 Male, age 80, left hemisphere 64.3
1873 Female, age 85, both hemispheres 63.8
2527 Male, age 74, both hemispheres 59.7
2082 Female, age 91, right hemisphere 56.1
2045 Male, age 76, both hemispheres 49.4
Hippocampus, CA2
nTPM: 62.0
1963 Male, age 80, left hemisphere 65.0
2437 Female, age 94, left hemisphere 62.9
2113 Female, age 91, right hemisphere 62.8
1892 Male, age 76, both hemispheres 62.2
1940 Female, age 85, left hemisphere 61.4
2249 Male, age 74, both hemispheres 57.7
Hippocampus, CA3
nTPM: 56.9
1891 Female, age 85, both hemispheres 71.5
2137 Male, age 80, left hemisphere 65.8
1867 Male, age 76, both hemispheres 59.7
2861 Female, age 67, both hemispheres 50.4
2620 Female, age 94, left hemisphere 50.1
2436 Male, age 74, both hemispheres 43.9
Parahippocampal cortex
nTPM: 60.9
1850 Male, age 80, both hemispheres 75.4
2692 Male, age 74, both hemispheres 71.0
2532 Female, age 72, left hemisphere 65.0
1933 Female, age 85, both hemispheres 64.1
1990 Female, age 91, right hemisphere 59.9
2245 Female, age 91, both hemispheres 59.3
2250 Female, age 67, right hemisphere 55.8
2622 Female, age 67, right hemisphere 54.6
2693 Female, age 94, both hemispheres 52.6
2018 Male, age 76, both hemispheres 50.8
Perirhinal gyrus
nTPM: 59.3
1841 Female, age 85, right hemisphere 64.2
2848 Male, age 76, right hemisphere 60.0
1847 Female, age 91, left hemisphere 59.7
1794 Male, age 80, right hemisphere 58.6
2521 Female, age 94, right hemisphere 54.1
Subiculum
nTPM: 66.1
2438 Female, age 94, left hemisphere 83.2
1901 Male, age 80, both hemispheres 73.7
2042 Male, age 76, both hemispheres 63.4
1977 Female, age 85, both hemispheres 61.4
2729 Female, age 91, right hemisphere 58.7
2619 Male, age 74, both hemispheres 56.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.4
Samples: 197

Max nTPM: 225.3
Min nTPM: 16.3
Std nTPM: 27.9
Median nTPM: 68.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 225.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 188.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 171.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 159.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 158.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 153.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 139.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 138.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 135.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 131.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 124.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.8
FF:10153-102I9 76 years, female 62.0
FF:10169-103B7 60 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.4
Samples: 4

Max nTPM: 59.3
Min nTPM: 36.3
Sample A Female 52.2
Sample B Female 45.9
Sample C Male 59.3
Sample D Male 36.3
Entorhinal cortex
nTPM: 44.5
Samples: 4

Max nTPM: 49.5
Min nTPM: 41.7
Sample A Female 41.7
Sample B Female 49.5
Sample C Male 44.0
Sample D Male 42.7
Subiculum
nTPM: 46.2
Samples: 4

Max nTPM: 56.2
Min nTPM: 42.6
Sample A Female 56.2
Sample B Female 43.1
Sample C Male 43.0
Sample D Male 42.6
Ventral hippocampus
nTPM: 42.6
Samples: 4

Max nTPM: 46.2
Min nTPM: 37.7
Sample A Female 41.9
Sample B Female 37.7
Sample C Male 44.7
Sample D Male 46.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.6
Samples: 4

Max nTPM: 57.6
Min nTPM: 55.0
Sample A Male 57.3
Sample B Male 55.0
Sample C Female 57.6
Sample D Female 56.4
Hippocampal formation
nTPM: 64.9
Samples: 4

Max nTPM: 79.5
Min nTPM: 57.1
Sample A Male 57.1
Sample B Male 63.0
Sample C Female 79.5
Sample D Female 60.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
77620471 Antisense, RP_070129_03_E01, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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