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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi 		60.734
RNA expressioni
Consensus:82.2 nTPM
HPA:82.2 nTPM
GTEx:47.1 nTPM
FANTOM5:108.3 Scaled Tags Per Million
Pig:31.3 nTPM
Mouse:23.3 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023335
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA024797
Hippocampal formation mean intensity 60.734
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 15.222
Molecular layer of the dentate gyrus 19.091
Granular dentate gyrus 60.734
CA1 - oriens layer 20.323
CA1 - pyramidal layer 55.558
CA1 - radiatum layer 25.136
CA2 - oriens layer 23.160
CA2 - pyramidal layer 53.557
CA2 - radiatum layer 28.534
CA3 - oriens layer 23.802
CA3 - pyramidal layer 42.682
CA3 - radiatum layer 27.378
Stratum lucidum 19.798
Lacunosum moleculare 12.324
Subiculum 42.152

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.2
Sample id Sample description nTPM
Hippocampus
nTPM: 82.2
2529 Female, age 94, left hemisphere 88.3
1911 Female, age 85, right hemisphere 87.0
1898 Male, age 80, left hemisphere 84.3
2148 Female, age 91, left hemisphere 83.8
1855 Male, age 76, left hemisphere 76.6
2621 Female, age 67, right hemisphere 73.5
Dentate gyrus
nTPM: 77.8
2528 Male, age 74, both hemispheres 99.5
2530 Female, age 94, left hemisphere 80.3
2531 Female, age 67, both hemispheres 77.4
2246 Female, age 85, both hemispheres 76.1
1927 Female, age 91, both hemispheres 68.7
2010 Male, age 76, both hemispheres 64.7
Entorhinal gyrus
nTPM: 70.6
2117 Female, age 91, right hemisphere 85.3
1938 Female, age 85, left hemisphere 73.2
1787 Male, age 76, left hemisphere 68.0
2686 Male, age 75, right hemisphere 67.9
2764 Male, age 80, right hemisphere 67.8
2613 Female, age 94, left hemisphere 61.4
Hippocampus, CA1
nTPM: 74.9
1873 Female, age 85, both hemispheres 87.1
2527 Male, age 74, both hemispheres 86.9
2082 Female, age 91, right hemisphere 78.1
2045 Male, age 76, both hemispheres 68.0
2749 Male, age 80, left hemisphere 54.5
Hippocampus, CA2
nTPM: 76.2
2249 Male, age 74, both hemispheres 89.2
1963 Male, age 80, left hemisphere 79.7
2113 Female, age 91, right hemisphere 77.7
1940 Female, age 85, left hemisphere 77.4
2437 Female, age 94, left hemisphere 74.1
1892 Male, age 76, both hemispheres 59.0
Hippocampus, CA3
nTPM: 78.2
2861 Female, age 67, both hemispheres 91.6
2620 Female, age 94, left hemisphere 89.3
2436 Male, age 74, both hemispheres 81.5
1891 Female, age 85, both hemispheres 79.8
1867 Male, age 76, both hemispheres 65.1
2137 Male, age 80, left hemisphere 61.7
Parahippocampal cortex
nTPM: 67.2
2692 Male, age 74, both hemispheres 81.5
2622 Female, age 67, right hemisphere 72.3
1933 Female, age 85, both hemispheres 70.5
1990 Female, age 91, right hemisphere 66.6
2250 Female, age 67, right hemisphere 66.0
2018 Male, age 76, both hemispheres 65.9
2245 Female, age 91, both hemispheres 65.4
1850 Male, age 80, both hemispheres 62.5
2532 Female, age 72, left hemisphere 60.8
2693 Female, age 94, both hemispheres 60.7
Perirhinal gyrus
nTPM: 62.5
1794 Male, age 80, right hemisphere 66.6
1841 Female, age 85, right hemisphere 65.7
1847 Female, age 91, left hemisphere 61.1
2848 Male, age 76, right hemisphere 60.3
2521 Female, age 94, right hemisphere 58.9
Subiculum
nTPM: 75.3
2729 Female, age 91, right hemisphere 94.2
2619 Male, age 74, both hemispheres 90.6
2042 Male, age 76, both hemispheres 68.6
1977 Female, age 85, both hemispheres 67.5
2438 Female, age 94, left hemisphere 65.7
1901 Male, age 80, both hemispheres 65.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.1
Samples: 197

Max nTPM: 99.7
Min nTPM: 15.5
Std nTPM: 15.7
Median nTPM: 44.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 99.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 97.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 91.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 90.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 79.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 78.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 77.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 77.0
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 76.1
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 76.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 75.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.3
FF:10153-102I9 76 years, female 127.7
FF:10169-103B7 60 years, female 88.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.0
Samples: 4

Max nTPM: 30.4
Min nTPM: 25.6
Sample A Female 30.4
Sample B Female 25.6
Sample C Male 29.6
Sample D Male 30.2
Entorhinal cortex
nTPM: 25.8
Samples: 4

Max nTPM: 28.7
Min nTPM: 22.1
Sample A Female 24.1
Sample B Female 28.7
Sample C Male 28.2
Sample D Male 22.1
Subiculum
nTPM: 27.0
Samples: 4

Max nTPM: 32.3
Min nTPM: 22.4
Sample A Female 32.3
Sample B Female 24.2
Sample C Male 22.4
Sample D Male 29.0
Ventral hippocampus
nTPM: 31.4
Samples: 4

Max nTPM: 41.6
Min nTPM: 25.6
Sample A Female 32.0
Sample B Female 25.6
Sample C Male 41.6
Sample D Male 26.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 26.1
Min nTPM: 20.2
Sample A Male 26.1
Sample B Male 21.1
Sample C Female 21.4
Sample D Female 20.2
Hippocampal formation
nTPM: 23.4
Samples: 4

Max nTPM: 25.0
Min nTPM: 22.0
Sample A Male 22.0
Sample B Male 25.0
Sample C Female 22.9
Sample D Female 23.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
71723875 Antisense, RP_050921_01_A11, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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