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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:83.5 nTPM
HPA:83.5 nTPM
GTEx:61.5 nTPM
FANTOM5:61.2 Scaled Tags Per Million
Mouse:68.8 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024821Antibody HPA058548
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.5
Sample id Sample description nTPM
Hippocampus
nTPM: 83.5
2529 Female, age 94, left hemisphere 86.9
2148 Female, age 91, left hemisphere 84.4
2621 Female, age 67, right hemisphere 84.2
1898 Male, age 80, left hemisphere 83.8
1855 Male, age 76, left hemisphere 80.9
1911 Female, age 85, right hemisphere 80.9
Dentate gyrus
nTPM: 82.6
2530 Female, age 94, left hemisphere 86.6
2531 Female, age 67, both hemispheres 85.1
2528 Male, age 74, both hemispheres 81.8
2010 Male, age 76, both hemispheres 81.6
1927 Female, age 91, both hemispheres 80.9
2246 Female, age 85, both hemispheres 79.4
Entorhinal gyrus
nTPM: 83.4
2117 Female, age 91, right hemisphere 85.7
2764 Male, age 80, right hemisphere 85.5
1787 Male, age 76, left hemisphere 83.4
1938 Female, age 85, left hemisphere 82.7
2686 Male, age 75, right hemisphere 81.7
2613 Female, age 94, left hemisphere 81.6
Hippocampus, CA1
nTPM: 79.3
2527 Male, age 74, both hemispheres 81.2
2749 Male, age 80, left hemisphere 80.3
2082 Female, age 91, right hemisphere 79.2
1873 Female, age 85, both hemispheres 78.8
2045 Male, age 76, both hemispheres 77.0
Hippocampus, CA2
nTPM: 80.4
2437 Female, age 94, left hemisphere 84.2
1963 Male, age 80, left hemisphere 82.8
2113 Female, age 91, right hemisphere 80.5
1940 Female, age 85, left hemisphere 79.9
2249 Male, age 74, both hemispheres 77.8
1892 Male, age 76, both hemispheres 77.4
Hippocampus, CA3
nTPM: 82.6
2861 Female, age 67, both hemispheres 91.6
2620 Female, age 94, left hemisphere 84.4
1891 Female, age 85, both hemispheres 82.1
1867 Male, age 76, both hemispheres 80.0
2436 Male, age 74, both hemispheres 79.3
2137 Male, age 80, left hemisphere 78.4
Parahippocampal cortex
nTPM: 81.4
2532 Female, age 72, left hemisphere 85.9
2692 Male, age 74, both hemispheres 84.2
2245 Female, age 91, both hemispheres 83.7
2622 Female, age 67, right hemisphere 82.3
1933 Female, age 85, both hemispheres 81.5
1990 Female, age 91, right hemisphere 81.3
1850 Male, age 80, both hemispheres 80.5
2018 Male, age 76, both hemispheres 78.4
2250 Female, age 67, right hemisphere 78.4
2693 Female, age 94, both hemispheres 77.9
Perirhinal gyrus
nTPM: 81.8
1794 Male, age 80, right hemisphere 84.6
1841 Female, age 85, right hemisphere 81.7
2848 Male, age 76, right hemisphere 81.5
1847 Female, age 91, left hemisphere 81.2
2521 Female, age 94, right hemisphere 80.2
Subiculum
nTPM: 83.1
2438 Female, age 94, left hemisphere 87.3
2619 Male, age 74, both hemispheres 85.0
1977 Female, age 85, both hemispheres 82.4
1901 Male, age 80, both hemispheres 81.9
2729 Female, age 91, right hemisphere 81.3
2042 Male, age 76, both hemispheres 80.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.5
Samples: 197

Max nTPM: 98.1
Min nTPM: 35.6
Std nTPM: 12.0
Median nTPM: 59.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 98.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 97.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 94.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 91.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 90.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 89.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 89.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 88.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 87.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 86.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 86.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.2
FF:10153-102I9 76 years, female 66.0
FF:10169-103B7 60 years, female 56.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 68.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.3
Samples: 4

Max nTPM: 70.2
Min nTPM: 62.7
Sample A Male 70.1
Sample B Male 70.0
Sample C Female 70.2
Sample D Female 62.7
Hippocampal formation
nTPM: 68.9
Samples: 4

Max nTPM: 74.4
Min nTPM: 63.0
Sample A Male 74.4
Sample B Male 65.2
Sample C Female 72.8
Sample D Female 63.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
69080508 Antisense, RP_050324_02_B09, Mouse strain C57BL/6J (56 days, male) 9.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.