Single cell type - ZNF771 - The Human Protein Atlas

GENERAL INFORMATIONⁱ General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.
Gene nameⁱ Official gene symbol, which is typically a short form of the gene name, according to HGNC.	ZNF771
Gene descriptionⁱ Full gene name according to HGNC.	Zinc finger protein 771
Protein classⁱ Assigned HPA protein class(es) for the encoded protein(s). Read more	Transcription factors
Predicted locationⁱ All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions. Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached. Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s). The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location. Read more	Intracellular
Number of transcriptsⁱ Number of protein-coding transcripts from the gene as defined by Ensembl.	4

HUMAN PROTEIN ATLAS INFORMATIONⁱ Summary of RNA expression and protein localization based on data generated within the Human Protein Atlas project.
Single cell type expression clusterⁱ The RNA data was used to cluster genes according to their expression across single cell types. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity. Read more	Non-specific - Basic cellular processes (mainly)
Single cell type specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Cell type enhanced (Distal tubular cells)
Immune cell specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Low immune cell specificity
Immune cell distributionⁱ The RNA distribution category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: detected in all, detected in many, detected in some, detected in single and not detected. Read more	Detected in many
Cell line specificityⁱ RNA specificity category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into six different categories (enriched, group enriched, enhanced, low specificity and not detected) according to their RNA expression levels across the panel of cell lines. Read more	Cell line enhanced (HEK93, REH)
Cell line distributionⁱ RNA distribution category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into five different categories (detected in all, detected in many, detected in some, detected in single and not detected) according to their pattern of detected RNA expression across the panel of cell lines. Read more	Detected in all
Protein evidenceⁱ Evidence score for genes based on UniProt protein existence (UniProt evidence); a Human Protein Atlas antibody- or RNA based score (HPA evidence); and evidence based on PeptideAtlas (MS evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable. Read more	Evidence at protein level

SINGLE CELL TYPESⁱ A summary of single cell RNA (nTPM) from all single cell types. Color-coding is based on cell type groups, each consisting of cell types with functional features in common.
Single cell types Group Expression Alphabetical RNA single cell type specificity: Cell type enhanced (Distal tubular cells)

SINGLE CELL TISSUES OVERVIEWⁱ An overview of all tissues where single cell type expression has been analyzed. Each tissue name and corresponding UMAP plot is clickable and redirects to the selected tissue.
Adipose tissue Bone marrow Brain Breast Bronchus Colon Endometrium Esophagus Eye Heart muscle Kidney Liver Lung Lymph node Ovary Pancreas Placenta Prostate Rectum Skeletal muscle Skin Small intestine Spleen Stomach Testis

EXPRESSION CLUSTERING & CORRELATIONⁱ

ZNF771 is part of cluster 39 Non-specific - Basic cellular processes with confidenceⁱ 1
586 genes in cluster

Go to interactive expression cluster page

15 nearest neighbours based on single cell type RNA expression

Neighbourⁱ Gene name according to HGNC.	Descriptionⁱ Gene description according to HGNC.	Correlationⁱ Correlation between the selected gene and neighboring gene. Correlation is calculated as Spearman correlation in PCA space based on the RNA-seq expression data. Read more	Clusterⁱ ID of the expression cluster of the neighboring gene. Read more
DNAJC19	DnaJ heat shock protein family (Hsp40) member C19	0.5387	39
BCL7C	BAF chromatin remodeling complex subunit BCL7C	0.5381	14
NEURL2	Neuralized E3 ubiquitin protein ligase 2	0.5211	48
IRF2BP1	Interferon regulatory factor 2 binding protein 1	0.5093	39
NUCKS1	Nuclear casein kinase and cyclin dependent kinase substrate 1	0.5033	2
DEXI	Dexi homolog	0.4983	22
CTF1	Cardiotrophin 1	0.4976	39
THRA	Thyroid hormone receptor alpha	0.4948	50
NENF	Neudesin neurotrophic factor	0.4927	10
UFSP1	UFM1 specific peptidase 1 (inactive)	0.4927	67
FBXO17	F-box protein 17	0.4926	48
GSTT2B	Glutathione S-transferase theta 2B	0.4887	33
MBLAC1	Metallo-beta-lactamase domain containing 1	0.4788	39
PHYHD1	Phytanoyl-CoA dioxygenase domain containing 1	0.4755	67
PFN2	Profilin 2	0.4755	39

SINGLE CELL TISSUESⁱ Single cell RNA levels of annotated cell type clusters are shown separately for each analyzed tissue. For easier navigation across tissues, use the above Single cell tissue overview, where each tissue name and UMAP plot is clickable and redirects to the selected tissue, alternatively the grey browser on the left side of the window. Barchart shows nTPM levels in each annotated cluster of single cells. To the left, a UMAP plot illustrates the RNA expression profile. The tissue name and plots are clickable and redirect to a more detailed interactive page. Color-coding is based on cell type groups, each consisting of cell types with functional features in common. Please note that the same cell type may be found in several clusters.
Cluster Expression Alphabetical Adipose tissue
Cluster Expression Alphabetical Bone marrow
Cluster Expression Alphabetical Brain
Cluster Expression Alphabetical Breast
Cluster Expression Alphabetical Bronchus
Cluster Expression Alphabetical Colon
Cluster Expression Alphabetical Endometrium
Cluster Expression Alphabetical Esophagus
Cluster Expression Alphabetical Eye
Cluster Expression Alphabetical Heart muscle
Cluster Expression Alphabetical Kidney
Cluster Expression Alphabetical Liver
Cluster Expression Alphabetical Lung
Cluster Expression Alphabetical Lymph node
Cluster Expression Alphabetical Ovary
Cluster Expression Alphabetical Pancreas
Cluster Expression Alphabetical Placenta
Cluster Expression Alphabetical Prostate
Cluster Expression Alphabetical Rectum
Cluster Expression Alphabetical Skeletal muscle
Cluster Expression Alphabetical Skin
Cluster Expression Alphabetical Small intestine
Cluster Expression Alphabetical Spleen
Cluster Expression Alphabetical Stomach
Cluster Expression Alphabetical Testis

BLOODⁱ

Single cell data

Cluster

Expression

Alphabetical

PBMC

Flow sorted data

Lineage

Expression

Alphabetical

CELL LINESⁱ

Organ

Expression

Alphabetical

Adipocytes	5.4 nTPM
Breast	7.2 nTPM
Adipose tissue	3.6 nTPM

Alveolar cells type 1	3.2 nTPM
Lung	3.2 nTPM

Alveolar cells type 2	0.5 nTPM
Lung	0.5 nTPM

Astrocytes	6.2 nTPM
Brain	6.2 nTPM

B-cells	3.7 nTPM
Breast	8.1 nTPM
Bone marrow	6.6 nTPM
Kidney	4.8 nTPM
Spleen	4.2 nTPM
Liver	3.7 nTPM
PBMC	2.8 nTPM
Lymph node	2.2 nTPM
Adipose tissue	2.0 nTPM
Colon	1.6 nTPM
Stomach	1.4 nTPM

Dendritic cells	7.2 nTPM
PBMC	12.0 nTPM
Breast	7.2 nTPM
Adipose tissue	2.5 nTPM

Endothelial cells	7.6 nTPM
Testis	12.5 nTPM
Liver	11.0 nTPM
Breast	11.0 nTPM
Esophagus	10.3 nTPM
Endometrium	9.0 nTPM
Eye	8.9 nTPM
Ovary	8.3 nTPM
Skin	7.1 nTPM
Lung	6.2 nTPM
Prostate	6.2 nTPM
Placenta	5.7 nTPM
Skeletal muscle	5.6 nTPM
Heart muscle	5.0 nTPM
Pancreas	0.0 nTPM

Fibroblasts	12.4 nTPM
Prostate	22.5 nTPM
Ovary	19.1 nTPM
Heart muscle	17.3 nTPM
Esophagus	15.7 nTPM
Breast	14.8 nTPM
Skeletal muscle	12.0 nTPM
Skin	11.5 nTPM
Placenta	8.3 nTPM
Adipose tissue	8.0 nTPM
Stomach	6.0 nTPM
Lung	1.2 nTPM

Intestinal goblet cells	10.0 nTPM
Colon	12.9 nTPM
Small intestine	9.0 nTPM
Rectum	8.1 nTPM

Macrophages	3.2 nTPM
PBMC	13.6 nTPM
Kidney	5.3 nTPM
Pancreas	5.1 nTPM
Breast	4.8 nTPM
Prostate	3.4 nTPM
Ovary	3.2 nTPM
Testis	2.9 nTPM
Stomach	2.9 nTPM
Endometrium	2.4 nTPM
Skeletal muscle	2.1 nTPM
Bone marrow	1.2 nTPM
Lung	0.6 nTPM
Adipose tissue	0.5 nTPM
Esophagus	0.0 nTPM
Spleen	0.0 nTPM

Paneth cells	5.1 nTPM
Small intestine	7.5 nTPM
Rectum	4.6 nTPM
Colon	3.3 nTPM

Plasma cells	4.4 nTPM
Stomach	6.7 nTPM
Esophagus	6.1 nTPM
Spleen	4.2 nTPM
Adipose tissue	3.3 nTPM
Bone marrow	1.7 nTPM

Respiratory ciliated cells	0.7 nTPM
Bronchus	1.4 nTPM
Lung	0.0 nTPM

Smooth muscle cells	12.0 nTPM
Bronchus	28.3 nTPM
Esophagus	17.0 nTPM
Skeletal muscle	13.9 nTPM
Pancreas	13.2 nTPM
Endometrium	11.5 nTPM
Ovary	10.8 nTPM
Prostate	10.1 nTPM
Breast	8.6 nTPM
Skin	8.0 nTPM
Adipose tissue	7.2 nTPM
Heart muscle	3.7 nTPM

T-cells	5.1 nTPM
Kidney	12.3 nTPM
Breast	7.3 nTPM
Skin	6.9 nTPM
Esophagus	6.6 nTPM
Endometrium	6.4 nTPM
Liver	6.0 nTPM
PBMC	5.6 nTPM
Skeletal muscle	5.2 nTPM
Spleen	5.0 nTPM
Ovary	4.5 nTPM
Lymph node	4.5 nTPM
Bone marrow	4.4 nTPM
Colon	4.3 nTPM
Stomach	3.3 nTPM
Adipose tissue	2.8 nTPM
Lung	1.5 nTPM
Prostate	0.0 nTPM

Basal respiratory cells	1.8 nTPM
Bronchus	1.8 nTPM

Basal squamous epithelial cells	22.2 nTPM
Esophagus	22.2 nTPM

Cholangiocytes	20.0 nTPM
Liver	20.0 nTPM

Collecting duct cells	5.5 nTPM
Kidney	5.5 nTPM

Undifferentiated cells	10.0 nTPM
Small intestine	11.5 nTPM
Rectum	10.3 nTPM
Colon	8.3 nTPM

Adipose tissue

Bone marrow

Brain

Breast

Bronchus

Colon

Endometrium

Esophagus

Eye

Heart muscle

Kidney

Liver

Lung

Lymph node

Ovary

Pancreas

Placenta

Prostate

Rectum

Skeletal muscle

Skin

Small intestine

Spleen

Stomach

Testis

PBMC