ABOUTMENU
HELP
NEWS
S1PR5
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.0 nTPM
HPA:34.0 nTPM
GTEx:40.4 nTPM
FANTOM5:90.3 Scaled Tags Per Million
Pig:21.0 nTPM
Mouse:18.2 nTPM
Allen mouse:3.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 34.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 25.5
1830 Male, age 51, unknown 31.1
2019 Male, age 18, unknown 30.3
2411 Female, age 72, unknown 29.6
1833 Male, age 53, unknown 28.9
1870 Female, age 42, unknown 26.7
2828 Female, age 72, unknown 25.6
2586 Male, age 75, left hemisphere 22.2
2666 Male, age 74, left hemisphere 22.0
2219 Male, age 76, both hemispheres 19.5
1827 Male, age 72, unknown 19.2
Dorsal raphe nucleus
nTPM: 20.3
2750 Male, age 76, both hemispheres 33.7
2016 Female, age 72, unknown 20.1
1828 Male, age 53, unknown 19.3
2298 Female, age 72, unknown 14.6
2047 Male, age 72, unknown 14.0
Inferior colliculus
nTPM: 18.0
1848 Female, age 42, unknown 18.9
1890 Male, age 53, unknown 18.9
2849 Male, age 72, unknown 17.8
2097 Female, age 72, unknown 16.2
Median raphe nucleus
nTPM: 18.2
2220 Male, age 76, midline 18.2
Pedunculopontine tegmental nucleus
nTPM: 23.0
2334 Male, age 80, both hemispheres 26.4
2338 Male, age 61, both hemispheres 22.3
1921 Female, age 85, both hemispheres 20.2
Periaquaductal grey, anterior
nTPM: 17.5
2502 Female, age 75, unknown 20.0
1947 Male, age 18, unknown 16.8
1795 Male, age 51, unknown 15.8
Periaquaductal grey, dorsal
nTPM: 14.2
2464 Female, age 72, unknown 19.8
1831 Male, age 72, unknown 15.4
1840 Male, age 53, unknown 11.1
2850 Male, age 76, both hemispheres 10.7
Periaquaductal grey, lateral
nTPM: 15.6
2272 Male, age 74, both hemispheres 17.9
2053 Male, age 18, unknown 17.2
2140 Male, age 76, both hemispheres 11.6
Pretectal area
nTPM: 18.0
2316 Male, age 76, right hemisphere 26.0
1815 Male, age 53, unknown 23.3
2407 Male, age 75, both hemispheres 20.9
2007 Male, age 72, unknown 19.4
1817 Female, age 42, unknown 19.1
2825 Male, age 18, unknown 17.9
2273 Male, age 74, both hemispheres 16.4
2224 Female, age 72, unknown 15.8
1944 Female, age 72, unknown 13.4
1816 Male, age 51, unknown 13.3
2667 Female, age 75, unknown 12.8
Red nucleus
nTPM: 34.0
2823 Male, age 76, right hemisphere 39.1
1904 Male, age 53, unknown 37.2
1865 Male, age 51, unknown 36.7
2227 Male, age 72, unknown 36.4
2785 Male, age 18, unknown 36.0
2503 Female, age 72, unknown 35.1
2769 Male, age 72, unknown 35.1
1821 Female, age 72, unknown 33.5
2725 Female, age 75, unknown 33.2
2588 Male, age 74, left hemisphere 30.7
1954 Female, age 42, unknown 30.5
2584 Male, age 75, left hemisphere 23.9
Substantia nigra
nTPM: 19.6
2590 Female, age 75, unknown 24.7
2583 Male, age 75, right hemisphere 23.8
1851 Male, age 51, unknown 22.4
2409 Female, age 72, unknown 20.7
1889 Female, age 72, unknown 20.4
2699 Male, age 18, unknown 18.5
2241 Male, age 72, unknown 16.8
1941 Male, age 53, unknown 16.5
2665 Male, age 74, both hemispheres 16.2
1916 Female, age 42, unknown 15.9
Superior colliculus
nTPM: 22.6
1913 Female, age 42, unknown 32.3
1995 Male, age 72, unknown 32.0
1895 Male, age 76, right hemisphere 25.1
2587 Male, age 74, left hemisphere 24.0
1839 Male, age 51, unknown 23.0
2668 Female, age 75, unknown 21.2
1796 Male, age 53, unknown 20.4
2087 Female, age 72, unknown 16.1
2664 Male, age 75, both hemispheres 15.8
2261 Male, age 18, unknown 15.7
Ventral tegmental area
nTPM: 21.9
2223 Female, age 72, unknown 28.0
2410 Female, age 72, unknown 24.9
1942 Male, age 51, unknown 20.3
2218 Male, age 76, both hemispheres 20.1
2021 Male, age 53, unknown 19.5
1915 Female, age 42, unknown 18.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 40.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 40.4
Samples: 139

Max nTPM: 143.7
Min nTPM: 8.9
Std nTPM: 24.9
Median nTPM: 35.0
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 143.7
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 131.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 128.5
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 110.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 108.7
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 99.9
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 98.3
GTEX-139TS-0011-R2b-SM-5J1MX 60-69 years, male 90.6
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 90.2
GTEX-131XH-0011-R2b-SM-5DUVY 50-59 years, male 80.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ 70-79 years, male 78.4
Show allShow less

MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 90.3
FF:10158-103A5 76 years, female 90.3

MIDBRAIN - Pig RNA-seqi
Average nTPM 21.0
Pig sample Sample description nTPM
Midbrain
nTPM: 21.0
Samples: 4

Max nTPM: 40.2
Min nTPM: 10.5
Sample A Female 40.2
Sample B Female 20.8
Sample C Male 10.5
Sample D Male 12.4
Periaqueductal gray
nTPM: 14.0
Samples: 3

Max nTPM: 18.5
Min nTPM: 10.5
Sample B Female 18.5
Sample C Male 10.5
Sample D Male 12.9
Substantia nigra
nTPM: 19.6
Samples: 4

Max nTPM: 32.6
Min nTPM: 11.4
Sample A Female 19.6
Sample B Female 11.4
Sample C Male 14.6
Sample D Male 32.6
Superior colliculi
nTPM: 17.1
Samples: 4

Max nTPM: 22.3
Min nTPM: 7.0
Sample A Female 20.1
Sample B Female 7.0
Sample C Male 19.0
Sample D Male 22.3

MIDBRAIN - Mouse RNA-seqi
Average nTPM 18.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 18.2
Samples: 4

Max nTPM: 19.4
Min nTPM: 17.4
Sample A Male 19.4
Sample B Male 18.0
Sample C Female 17.4
Sample D Female 17.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 3.2
112651200 Antisense, RP_071127_02_B11, Mouse strain C57BL/6J (56 days, male) 3.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.