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PJA1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:47.1 nTPM
HPA:47.1 nTPM
GTEx:41.4 nTPM
FANTOM5:48.0 Scaled Tags Per Million
Pig:49.8 nTPM
Mouse:161.9 nTPM
Allen mouse:21.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000595
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.1
Sample id Sample description nTPM
Hippocampus
nTPM: 39.5
1898 Male, age 80, left hemisphere 44.0
2529 Female, age 94, left hemisphere 39.4
1855 Male, age 76, left hemisphere 39.1
2621 Female, age 67, right hemisphere 39.1
2148 Female, age 91, left hemisphere 38.1
1911 Female, age 85, right hemisphere 37.2
Dentate gyrus
nTPM: 40.4
2531 Female, age 67, both hemispheres 42.6
2246 Female, age 85, both hemispheres 41.7
1927 Female, age 91, both hemispheres 41.6
2528 Male, age 74, both hemispheres 40.4
2010 Male, age 76, both hemispheres 39.6
2530 Female, age 94, left hemisphere 36.3
Entorhinal gyrus
nTPM: 41.8
2764 Male, age 80, right hemisphere 46.5
1938 Female, age 85, left hemisphere 42.5
2613 Female, age 94, left hemisphere 42.1
1787 Male, age 76, left hemisphere 41.9
2117 Female, age 91, right hemisphere 38.9
2686 Male, age 75, right hemisphere 38.7
Hippocampus, CA1
nTPM: 42.8
2749 Male, age 80, left hemisphere 47.8
2045 Male, age 76, both hemispheres 43.2
2082 Female, age 91, right hemisphere 41.3
2527 Male, age 74, both hemispheres 41.0
1873 Female, age 85, both hemispheres 40.8
Hippocampus, CA2
nTPM: 40.0
1892 Male, age 76, both hemispheres 43.9
1963 Male, age 80, left hemisphere 40.8
2249 Male, age 74, both hemispheres 40.6
2113 Female, age 91, right hemisphere 39.6
2437 Female, age 94, left hemisphere 37.9
1940 Female, age 85, left hemisphere 37.5
Hippocampus, CA3
nTPM: 41.3
2137 Male, age 80, left hemisphere 45.6
1867 Male, age 76, both hemispheres 43.3
2620 Female, age 94, left hemisphere 42.8
1891 Female, age 85, both hemispheres 39.3
2861 Female, age 67, both hemispheres 38.9
2436 Male, age 74, both hemispheres 38.1
Parahippocampal cortex
nTPM: 41.8
1850 Male, age 80, both hemispheres 46.1
2245 Female, age 91, both hemispheres 44.1
2250 Female, age 67, right hemisphere 43.3
1933 Female, age 85, both hemispheres 42.8
2532 Female, age 72, left hemisphere 42.7
1990 Female, age 91, right hemisphere 41.8
2693 Female, age 94, both hemispheres 41.1
2018 Male, age 76, both hemispheres 40.9
2622 Female, age 67, right hemisphere 38.1
2692 Male, age 74, both hemispheres 36.8
Perirhinal gyrus
nTPM: 47.1
1847 Female, age 91, left hemisphere 49.9
1794 Male, age 80, right hemisphere 49.6
2521 Female, age 94, right hemisphere 46.1
1841 Female, age 85, right hemisphere 45.7
2848 Male, age 76, right hemisphere 44.4
Subiculum
nTPM: 40.5
1977 Female, age 85, both hemispheres 45.5
1901 Male, age 80, both hemispheres 41.5
2438 Female, age 94, left hemisphere 40.2
2042 Male, age 76, both hemispheres 38.7
2619 Male, age 74, both hemispheres 38.6
2729 Female, age 91, right hemisphere 38.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.4
Samples: 197

Max nTPM: 120.4
Min nTPM: 14.1
Std nTPM: 15.5
Median nTPM: 40.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 120.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 110.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 109.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 74.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 69.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 68.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 67.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 67.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 67.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 66.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 62.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.0
FF:10153-102I9 76 years, female 49.0
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.5
Samples: 4

Max nTPM: 55.4
Min nTPM: 41.4
Sample A Female 55.4
Sample B Female 51.4
Sample C Male 41.9
Sample D Male 41.4
Entorhinal cortex
nTPM: 37.4
Samples: 4

Max nTPM: 40.1
Min nTPM: 35.1
Sample A Female 40.1
Sample B Female 38.1
Sample C Male 36.2
Sample D Male 35.1
Subiculum
nTPM: 44.1
Samples: 4

Max nTPM: 58.5
Min nTPM: 33.2
Sample A Female 58.5
Sample B Female 40.0
Sample C Male 44.5
Sample D Male 33.2
Ventral hippocampus
nTPM: 49.8
Samples: 4

Max nTPM: 59.1
Min nTPM: 37.9
Sample A Female 53.0
Sample B Female 37.9
Sample C Male 59.1
Sample D Male 49.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 161.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 162.0
Samples: 4

Max nTPM: 168.5
Min nTPM: 144.2
Sample A Male 144.2
Sample B Male 167.7
Sample C Female 167.4
Sample D Female 168.5
Hippocampal formation
nTPM: 160.6
Samples: 4

Max nTPM: 166.5
Min nTPM: 157.4
Sample A Male 166.5
Sample B Male 160.2
Sample C Female 157.4
Sample D Female 158.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.7
74581229 Antisense, RP_060215_02_G12, Mouse strain C57BL/6J (56 days, male) 21.7

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The Human Protein Atlas

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