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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:24.2 nTPM
HPA:24.2 nTPM
GTEx:15.6 nTPM
FANTOM5:25.7 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:40.7 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043434
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.2
Sample id Sample description nTPM
Hippocampus
nTPM: 19.5
1855 Male, age 76, left hemisphere 21.1
1898 Male, age 80, left hemisphere 20.4
1911 Female, age 85, right hemisphere 19.5
2529 Female, age 94, left hemisphere 18.7
2621 Female, age 67, right hemisphere 18.7
2148 Female, age 91, left hemisphere 18.6
Dentate gyrus
nTPM: 20.0
2010 Male, age 76, both hemispheres 21.1
2530 Female, age 94, left hemisphere 20.8
1927 Female, age 91, both hemispheres 20.3
2528 Male, age 74, both hemispheres 20.0
2246 Female, age 85, both hemispheres 19.1
2531 Female, age 67, both hemispheres 18.9
Entorhinal gyrus
nTPM: 20.5
2764 Male, age 80, right hemisphere 21.4
1787 Male, age 76, left hemisphere 20.8
1938 Female, age 85, left hemisphere 20.6
2117 Female, age 91, right hemisphere 20.3
2613 Female, age 94, left hemisphere 19.9
2686 Male, age 75, right hemisphere 19.8
Hippocampus, CA1
nTPM: 20.2
2749 Male, age 80, left hemisphere 23.0
1873 Female, age 85, both hemispheres 20.5
2527 Male, age 74, both hemispheres 19.5
2082 Female, age 91, right hemisphere 19.2
2045 Male, age 76, both hemispheres 18.6
Hippocampus, CA2
nTPM: 20.5
1892 Male, age 76, both hemispheres 21.9
1940 Female, age 85, left hemisphere 21.4
1963 Male, age 80, left hemisphere 20.8
2249 Male, age 74, both hemispheres 20.7
2113 Female, age 91, right hemisphere 19.8
2437 Female, age 94, left hemisphere 18.5
Hippocampus, CA3
nTPM: 19.6
1891 Female, age 85, both hemispheres 20.8
1867 Male, age 76, both hemispheres 20.1
2137 Male, age 80, left hemisphere 19.5
2436 Male, age 74, both hemispheres 19.4
2861 Female, age 67, both hemispheres 19.1
2620 Female, age 94, left hemisphere 18.6
Parahippocampal cortex
nTPM: 22.1
1850 Male, age 80, both hemispheres 24.8
2693 Female, age 94, both hemispheres 24.1
1933 Female, age 85, both hemispheres 23.8
2532 Female, age 72, left hemisphere 23.5
2245 Female, age 91, both hemispheres 21.6
2250 Female, age 67, right hemisphere 21.3
2018 Male, age 76, both hemispheres 20.8
2622 Female, age 67, right hemisphere 20.6
2692 Male, age 74, both hemispheres 20.2
1990 Female, age 91, right hemisphere 20.1
Perirhinal gyrus
nTPM: 24.2
1794 Male, age 80, right hemisphere 26.4
1841 Female, age 85, right hemisphere 26.3
2521 Female, age 94, right hemisphere 23.8
2848 Male, age 76, right hemisphere 22.8
1847 Female, age 91, left hemisphere 21.4
Subiculum
nTPM: 20.2
2042 Male, age 76, both hemispheres 22.3
1901 Male, age 80, both hemispheres 21.3
1977 Female, age 85, both hemispheres 20.2
2438 Female, age 94, left hemisphere 19.6
2619 Male, age 74, both hemispheres 19.5
2729 Female, age 91, right hemisphere 18.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.6
Samples: 197

Max nTPM: 31.4
Min nTPM: 3.5
Std nTPM: 4.3
Median nTPM: 15.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 31.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 30.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 28.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 27.7
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 25.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 24.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 23.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 23.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 23.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 22.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.7
FF:10153-102I9 76 years, female 28.3
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 19.2
Min nTPM: 13.4
Sample A Female 19.2
Sample B Female 16.0
Sample C Male 18.8
Sample D Male 13.4
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 20.7
Min nTPM: 18.5
Sample A Female 18.5
Sample B Female 20.7
Sample C Male 19.3
Sample D Male 18.5
Subiculum
nTPM: 16.4
Samples: 4

Max nTPM: 17.2
Min nTPM: 15.7
Sample A Female 17.2
Sample B Female 16.5
Sample C Male 15.7
Sample D Male 16.1
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.2
Sample A Female 14.4
Sample B Female 14.7
Sample C Male 12.2
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.7
Samples: 4

Max nTPM: 46.3
Min nTPM: 35.1
Sample A Male 46.3
Sample B Male 43.4
Sample C Female 35.1
Sample D Female 38.1
Hippocampal formation
nTPM: 31.8
Samples: 4

Max nTPM: 34.0
Min nTPM: 27.2
Sample A Male 32.8
Sample B Male 33.2
Sample C Female 34.0
Sample D Female 27.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68410327 Antisense, RP_041214_01_F09, Mouse strain C57BL/6J (56 days, male) 0.4

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