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FAM89A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.2 nTPM
HPA:14.2 nTPM
GTEx:14.5 nTPM
FANTOM5:10.6 Scaled Tags Per Million
Pig:4.3 nTPM
Mouse:1.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059052
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.2
1898 Male, age 80, left hemisphere 14.8
2148 Female, age 91, left hemisphere 14.8
2529 Female, age 94, left hemisphere 14.2
1855 Male, age 76, left hemisphere 14.0
1911 Female, age 85, right hemisphere 13.9
2621 Female, age 67, right hemisphere 13.3
Dentate gyrus
nTPM: 13.7
2530 Female, age 94, left hemisphere 14.9
2528 Male, age 74, both hemispheres 14.8
2010 Male, age 76, both hemispheres 13.5
2531 Female, age 67, both hemispheres 13.4
2246 Female, age 85, both hemispheres 13.2
1927 Female, age 91, both hemispheres 12.2
Entorhinal gyrus
nTPM: 12.8
2117 Female, age 91, right hemisphere 15.3
1938 Female, age 85, left hemisphere 13.0
1787 Male, age 76, left hemisphere 12.5
2686 Male, age 75, right hemisphere 12.4
2764 Male, age 80, right hemisphere 12.0
2613 Female, age 94, left hemisphere 11.7
Hippocampus, CA1
nTPM: 13.1
2527 Male, age 74, both hemispheres 14.3
1873 Female, age 85, both hemispheres 13.8
2045 Male, age 76, both hemispheres 12.8
2082 Female, age 91, right hemisphere 12.5
2749 Male, age 80, left hemisphere 11.9
Hippocampus, CA2
nTPM: 13.3
1963 Male, age 80, left hemisphere 13.7
2249 Male, age 74, both hemispheres 13.7
1940 Female, age 85, left hemisphere 13.5
2437 Female, age 94, left hemisphere 13.3
2113 Female, age 91, right hemisphere 13.1
1892 Male, age 76, both hemispheres 12.4
Hippocampus, CA3
nTPM: 13.5
2436 Male, age 74, both hemispheres 15.0
2861 Female, age 67, both hemispheres 13.9
1867 Male, age 76, both hemispheres 13.6
1891 Female, age 85, both hemispheres 13.5
2620 Female, age 94, left hemisphere 12.6
2137 Male, age 80, left hemisphere 12.2
Parahippocampal cortex
nTPM: 12.5
2250 Female, age 67, right hemisphere 13.9
2018 Male, age 76, both hemispheres 13.2
1933 Female, age 85, both hemispheres 13.0
2245 Female, age 91, both hemispheres 12.8
1990 Female, age 91, right hemisphere 12.7
2692 Male, age 74, both hemispheres 12.2
2622 Female, age 67, right hemisphere 12.1
1850 Male, age 80, both hemispheres 11.9
2693 Female, age 94, both hemispheres 11.8
2532 Female, age 72, left hemisphere 11.7
Perirhinal gyrus
nTPM: 12.2
1841 Female, age 85, right hemisphere 12.8
1847 Female, age 91, left hemisphere 12.5
2521 Female, age 94, right hemisphere 12.0
1794 Male, age 80, right hemisphere 11.9
2848 Male, age 76, right hemisphere 11.7
Subiculum
nTPM: 13.5
2729 Female, age 91, right hemisphere 16.4
1977 Female, age 85, both hemispheres 13.3
2619 Male, age 74, both hemispheres 13.3
2042 Male, age 76, both hemispheres 13.1
1901 Male, age 80, both hemispheres 12.8
2438 Female, age 94, left hemisphere 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.5
Samples: 197

Max nTPM: 36.4
Min nTPM: 4.9
Std nTPM: 5.6
Median nTPM: 14.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 36.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 33.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 30.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 29.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 29.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 26.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 25.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 25.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 24.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 24.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.6
FF:10153-102I9 76 years, female 15.0
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 4.0
Sample C Male 3.7
Sample D Male 6.2
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.8
Sample A Female 4.3
Sample B Female 3.8
Sample C Male 4.1
Sample D Male 5.2
Subiculum
nTPM: 4.1
Samples: 4

Max nTPM: 5.0
Min nTPM: 2.2
Sample A Female 2.2
Sample B Female 4.4
Sample C Male 5.0
Sample D Male 4.6
Ventral hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.1
Sample A Female 3.7
Sample B Female 5.2
Sample C Male 3.1
Sample D Male 4.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.6
Sample A Male 1.1
Sample B Male 0.6
Sample C Female 0.9
Sample D Female 0.8
Hippocampal formation
nTPM: 1.1
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.8
Sample A Male 1.3
Sample B Male 0.8
Sample C Female 1.1
Sample D Female 1.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69202418 Antisense, RP_050324_03_F07, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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