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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:43.2 nTPM
HPA:43.2 nTPM
GTEx:38.7 nTPM
FANTOM5:115.8 Scaled Tags Per Million
Pig:27.8 nTPM
Mouse:57.2 nTPM
Allen mouse:9.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 43.2
Sample id Sample description nTPM
Amygdala
nTPM: 43.2
2695 Female, age 67, right hemisphere 49.9
2514 Male, age 75, right hemisphere 45.4
2814 Male, age 76, right hemisphere 41.8
2517 Female, age 94, left hemisphere 40.1
1987 Female, age 91, left hemisphere 38.8
Basal amygdala
nTPM: 40.4
2609 Male, age 75, right hemisphere 43.1
2827 Female, age 67, right hemisphere 42.7
2110 Male, age 80, left hemisphere 40.9
1955 Male, age 76, both hemispheres 39.6
2685 Female, age 94, left hemisphere 38.6
2243 Female, age 91, right hemisphere 37.6
Central amygdala
nTPM: 40.8
1905 Male, age 76, both hemispheres 45.1
2826 Female, age 94, left hemisphere 42.4
2515 Male, age 75, right hemisphere 39.5
2701 Female, age 91, right hemisphere 39.5
2239 Male, age 80, left hemisphere 37.6
Corticomedial amygdala
nTPM: 39.8
2428 Male, age 75, right hemisphere 41.9
2829 Male, age 80, left hemisphere 40.6
2240 Male, age 76, both hemispheres 40.5
2429 Female, age 94, left hemisphere 39.8
2535 Female, age 67, right hemisphere 38.8
2242 Female, age 91, right hemisphere 37.3
Lateral amygdala
nTPM: 41.3
2830 Female, age 67, right hemisphere 46.8
2516 Male, age 75, right hemisphere 45.5
1883 Male, age 76, both hemispheres 40.6
2256 Male, age 80, left hemisphere 39.6
2534 Female, age 94, left hemisphere 38.2
2255 Female, age 91, right hemisphere 37.3
Stria terminalis, bed nucleus
nTPM: 39.2
2201 Male, age 74, unknown 40.1
2486 Female, age 94, both hemispheres 39.1
1974 Female, age 91, both hemispheres 38.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 38.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 38.7
Samples: 152

Max nTPM: 65.2
Min nTPM: 24.9
Std nTPM: 6.3
Median nTPM: 38.5
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 65.2
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 57.6
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 57.1
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 55.3
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 54.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 53.4
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 51.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 51.1
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 49.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 48.7
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 48.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 115.8
FF:10151-102I7 76 years, female 115.8

AMYGDALA - Pig RNA-seqi
Average nTPM 27.8
Pig sample Sample description nTPM
Amygdala
nTPM: 27.8
Samples: 4

Max nTPM: 30.7
Min nTPM: 24.8
Sample A Female 30.7
Sample B Female 30.6
Sample C Male 25.1
Sample D Male 24.8

AMYGDALA - Mouse RNA-seqi
Average nTPM 57.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 57.1
Samples: 4

Max nTPM: 61.3
Min nTPM: 49.9
Sample A Male 58.9
Sample B Male 61.3
Sample C Female 49.9
Sample D Female 58.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 9.9
76098327 Antisense, RP_060626_01_E11, Mouse strain C57BL/6J (56 days, male) 9.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.