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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:56.1 nTPM
HPA:56.1 nTPM
GTEx:48.4 nTPM
FANTOM5:106.8 Scaled Tags Per Million
Pig:46.7 nTPM
Mouse:17.2 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003157Antibody CAB003678
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.1
Sample id Sample description nTPM
Hippocampus
nTPM: 56.1
1855 Male, age 76, left hemisphere 62.8
2621 Female, age 67, right hemisphere 58.7
2529 Female, age 94, left hemisphere 56.8
1911 Female, age 85, right hemisphere 54.3
2148 Female, age 91, left hemisphere 52.9
1898 Male, age 80, left hemisphere 51.2
Dentate gyrus
nTPM: 53.6
2530 Female, age 94, left hemisphere 65.6
2010 Male, age 76, both hemispheres 56.8
2528 Male, age 74, both hemispheres 51.5
2246 Female, age 85, both hemispheres 50.8
2531 Female, age 67, both hemispheres 49.6
1927 Female, age 91, both hemispheres 47.4
Entorhinal gyrus
nTPM: 47.9
2117 Female, age 91, right hemisphere 52.6
2686 Male, age 75, right hemisphere 52.0
1787 Male, age 76, left hemisphere 51.8
1938 Female, age 85, left hemisphere 44.3
2764 Male, age 80, right hemisphere 44.3
2613 Female, age 94, left hemisphere 42.2
Hippocampus, CA1
nTPM: 49.1
2045 Male, age 76, both hemispheres 58.0
2527 Male, age 74, both hemispheres 51.0
1873 Female, age 85, both hemispheres 48.5
2082 Female, age 91, right hemisphere 44.0
2749 Male, age 80, left hemisphere 44.0
Hippocampus, CA2
nTPM: 52.2
1940 Female, age 85, left hemisphere 61.6
2437 Female, age 94, left hemisphere 56.4
1963 Male, age 80, left hemisphere 51.7
2249 Male, age 74, both hemispheres 50.4
1892 Male, age 76, both hemispheres 48.8
2113 Female, age 91, right hemisphere 44.5
Hippocampus, CA3
nTPM: 51.0
2861 Female, age 67, both hemispheres 58.6
1867 Male, age 76, both hemispheres 51.5
1891 Female, age 85, both hemispheres 50.4
2620 Female, age 94, left hemisphere 50.0
2436 Male, age 74, both hemispheres 49.1
2137 Male, age 80, left hemisphere 46.5
Parahippocampal cortex
nTPM: 47.8
2018 Male, age 76, both hemispheres 62.9
2692 Male, age 74, both hemispheres 51.9
2245 Female, age 91, both hemispheres 50.1
2532 Female, age 72, left hemisphere 49.6
2622 Female, age 67, right hemisphere 47.5
2250 Female, age 67, right hemisphere 45.5
1990 Female, age 91, right hemisphere 44.0
1850 Male, age 80, both hemispheres 43.9
2693 Female, age 94, both hemispheres 42.1
1933 Female, age 85, both hemispheres 40.9
Perirhinal gyrus
nTPM: 44.0
2521 Female, age 94, right hemisphere 52.7
1794 Male, age 80, right hemisphere 44.3
2848 Male, age 76, right hemisphere 43.7
1841 Female, age 85, right hemisphere 41.9
1847 Female, age 91, left hemisphere 37.5
Subiculum
nTPM: 52.6
2042 Male, age 76, both hemispheres 68.1
2438 Female, age 94, left hemisphere 56.5
1901 Male, age 80, both hemispheres 50.8
2619 Male, age 74, both hemispheres 50.8
2729 Female, age 91, right hemisphere 47.9
1977 Female, age 85, both hemispheres 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.4
Samples: 197

Max nTPM: 130.7
Min nTPM: 14.2
Std nTPM: 22.3
Median nTPM: 44.7
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 130.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 117.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 112.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 109.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 103.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 101.8
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 96.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 95.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 91.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 90.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 90.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.8
FF:10153-102I9 76 years, female 127.9
FF:10169-103B7 60 years, female 85.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.5
Samples: 4

Max nTPM: 54.7
Min nTPM: 25.2
Sample A Female 54.7
Sample B Female 38.4
Sample C Male 43.8
Sample D Male 25.2
Entorhinal cortex
nTPM: 37.8
Samples: 4

Max nTPM: 57.6
Min nTPM: 20.5
Sample A Female 57.6
Sample B Female 28.0
Sample C Male 45.2
Sample D Male 20.5
Subiculum
nTPM: 46.7
Samples: 4

Max nTPM: 60.3
Min nTPM: 25.9
Sample A Female 60.3
Sample B Female 25.9
Sample C Male 47.3
Sample D Male 53.4
Ventral hippocampus
nTPM: 45.7
Samples: 4

Max nTPM: 73.2
Min nTPM: 27.9
Sample A Female 37.6
Sample B Female 27.9
Sample C Male 73.2
Sample D Male 44.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 20.1
Min nTPM: 13.0
Sample A Male 16.8
Sample B Male 13.0
Sample C Female 20.1
Sample D Female 18.8
Hippocampal formation
nTPM: 16.1
Samples: 4

Max nTPM: 23.1
Min nTPM: 11.3
Sample A Male 11.3
Sample B Male 13.4
Sample C Female 16.6
Sample D Female 23.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
68443178 Antisense, RP_050111_01_E05, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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