ABOUTMENU
HELP
NEWS
NTM
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:136.9 nTPM
HPA:136.9 nTPM
GTEx:52.9 nTPM
FANTOM5:281.3 Scaled Tags Per Million
Pig:69.2 nTPM
Mouse:180.9 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB024875
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.9
Sample id Sample description nTPM
Hippocampus
nTPM: 134.8
2529 Female, age 94, left hemisphere 153.1
1911 Female, age 85, right hemisphere 138.0
2148 Female, age 91, left hemisphere 134.9
2621 Female, age 67, right hemisphere 133.8
1855 Male, age 76, left hemisphere 129.0
1898 Male, age 80, left hemisphere 119.7
Dentate gyrus
nTPM: 133.6
2246 Female, age 85, both hemispheres 146.1
2528 Male, age 74, both hemispheres 137.5
2530 Female, age 94, left hemisphere 136.9
2531 Female, age 67, both hemispheres 128.0
2010 Male, age 76, both hemispheres 127.9
1927 Female, age 91, both hemispheres 125.0
Entorhinal gyrus
nTPM: 133.3
2117 Female, age 91, right hemisphere 137.5
2686 Male, age 75, right hemisphere 135.5
1787 Male, age 76, left hemisphere 134.1
1938 Female, age 85, left hemisphere 133.2
2764 Male, age 80, right hemisphere 130.2
2613 Female, age 94, left hemisphere 129.2
Hippocampus, CA1
nTPM: 130.7
2527 Male, age 74, both hemispheres 148.9
1873 Female, age 85, both hemispheres 136.1
2045 Male, age 76, both hemispheres 132.1
2082 Female, age 91, right hemisphere 122.4
2749 Male, age 80, left hemisphere 113.9
Hippocampus, CA2
nTPM: 131.5
2249 Male, age 74, both hemispheres 136.2
1963 Male, age 80, left hemisphere 132.7
2113 Female, age 91, right hemisphere 131.8
2437 Female, age 94, left hemisphere 130.4
1892 Male, age 76, both hemispheres 129.7
1940 Female, age 85, left hemisphere 128.0
Hippocampus, CA3
nTPM: 126.8
2861 Female, age 67, both hemispheres 132.0
1891 Female, age 85, both hemispheres 130.2
2620 Female, age 94, left hemisphere 130.1
2436 Male, age 74, both hemispheres 126.6
1867 Male, age 76, both hemispheres 122.8
2137 Male, age 80, left hemisphere 119.1
Parahippocampal cortex
nTPM: 136.5
2692 Male, age 74, both hemispheres 154.5
1933 Female, age 85, both hemispheres 141.7
2018 Male, age 76, both hemispheres 140.6
2622 Female, age 67, right hemisphere 137.7
2693 Female, age 94, both hemispheres 135.5
2532 Female, age 72, left hemisphere 134.6
2250 Female, age 67, right hemisphere 134.3
2245 Female, age 91, both hemispheres 132.1
1850 Male, age 80, both hemispheres 130.6
1990 Female, age 91, right hemisphere 123.8
Perirhinal gyrus
nTPM: 131.2
1794 Male, age 80, right hemisphere 133.7
2848 Male, age 76, right hemisphere 133.7
1841 Female, age 85, right hemisphere 131.3
2521 Female, age 94, right hemisphere 130.3
1847 Female, age 91, left hemisphere 127.1
Subiculum
nTPM: 136.9
2438 Female, age 94, left hemisphere 164.0
2619 Male, age 74, both hemispheres 142.1
2729 Female, age 91, right hemisphere 134.0
1901 Male, age 80, both hemispheres 127.9
1977 Female, age 85, both hemispheres 127.9
2042 Male, age 76, both hemispheres 125.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.9
Samples: 197

Max nTPM: 153.7
Min nTPM: 12.4
Std nTPM: 19.3
Median nTPM: 49.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 153.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 129.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 118.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 116.7
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 109.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 97.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 96.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 96.5
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 90.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 88.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 88.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 281.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 281.3
FF:10169-103B7 60 years, female 325.4
FF:10153-102I9 76 years, female 237.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.8
Samples: 4

Max nTPM: 46.8
Min nTPM: 29.6
Sample A Female 44.2
Sample B Female 46.4
Sample C Male 46.8
Sample D Male 29.6
Entorhinal cortex
nTPM: 69.2
Samples: 4

Max nTPM: 70.1
Min nTPM: 68.4
Sample A Female 68.4
Sample B Female 70.1
Sample C Male 69.2
Sample D Male 68.9
Subiculum
nTPM: 55.1
Samples: 4

Max nTPM: 68.3
Min nTPM: 47.4
Sample A Female 68.3
Sample B Female 53.3
Sample C Male 51.5
Sample D Male 47.4
Ventral hippocampus
nTPM: 38.3
Samples: 4

Max nTPM: 55.0
Min nTPM: 29.6
Sample A Female 29.6
Sample B Female 34.2
Sample C Male 34.3
Sample D Male 55.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 180.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 180.9
Samples: 4

Max nTPM: 198.1
Min nTPM: 153.0
Sample A Male 182.5
Sample B Male 198.1
Sample C Female 153.0
Sample D Female 190.1
Hippocampal formation
nTPM: 105.7
Samples: 4

Max nTPM: 129.3
Min nTPM: 90.8
Sample A Male 129.3
Sample B Male 101.4
Sample C Female 90.8
Sample D Female 101.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
77866868 Antisense, RP_070129_01_E11, Mouse strain C57BL/6J (56 days, male) 10.1
574 Antisense, RP_Baylor_103392, Mouse strain C57BL/6J (56 days, male) 4.6
573 Antisense, RP_Baylor_103392, Mouse strain C57BL/6J (56 days, male) 2.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.