ABOUTMENU
HELP
NEWS
CEP63
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:7.5 nTPM
HPA:7.5 nTPM
GTEx:13.2 nTPM
FANTOM5:42.3 Scaled Tags Per Million
Pig:21.7 nTPM
Mouse:15.0 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058154
Glial cells Medium
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.5
Sample id Sample description nTPM
Hippocampus
nTPM: 6.4
2529 Female, age 94, left hemisphere 7.9
2621 Female, age 67, right hemisphere 7.6
1855 Male, age 76, left hemisphere 6.1
1898 Male, age 80, left hemisphere 6.0
1911 Female, age 85, right hemisphere 5.7
2148 Female, age 91, left hemisphere 5.2
Dentate gyrus
nTPM: 5.9
2530 Female, age 94, left hemisphere 8.0
2010 Male, age 76, both hemispheres 6.2
2246 Female, age 85, both hemispheres 5.9
2531 Female, age 67, both hemispheres 5.5
1927 Female, age 91, both hemispheres 4.8
2528 Male, age 74, both hemispheres 4.8
Entorhinal gyrus
nTPM: 7.5
2686 Male, age 75, right hemisphere 9.7
1938 Female, age 85, left hemisphere 7.4
2117 Female, age 91, right hemisphere 7.4
1787 Male, age 76, left hemisphere 7.1
2764 Male, age 80, right hemisphere 7.0
2613 Female, age 94, left hemisphere 6.2
Hippocampus, CA1
nTPM: 5.3
2527 Male, age 74, both hemispheres 6.4
1873 Female, age 85, both hemispheres 6.2
2045 Male, age 76, both hemispheres 4.8
2082 Female, age 91, right hemisphere 4.5
2749 Male, age 80, left hemisphere 4.5
Hippocampus, CA2
nTPM: 6.3
1940 Female, age 85, left hemisphere 6.9
1892 Male, age 76, both hemispheres 6.5
2437 Female, age 94, left hemisphere 6.3
1963 Male, age 80, left hemisphere 6.2
2113 Female, age 91, right hemisphere 6.0
2249 Male, age 74, both hemispheres 5.8
Hippocampus, CA3
nTPM: 5.3
1891 Female, age 85, both hemispheres 6.4
2436 Male, age 74, both hemispheres 5.6
2861 Female, age 67, both hemispheres 5.5
2620 Female, age 94, left hemisphere 5.2
1867 Male, age 76, both hemispheres 5.0
2137 Male, age 80, left hemisphere 4.3
Parahippocampal cortex
nTPM: 7.5
2622 Female, age 67, right hemisphere 11.3
2018 Male, age 76, both hemispheres 8.5
2532 Female, age 72, left hemisphere 8.0
2692 Male, age 74, both hemispheres 8.0
1850 Male, age 80, both hemispheres 7.8
2245 Female, age 91, both hemispheres 7.8
2693 Female, age 94, both hemispheres 7.0
1933 Female, age 85, both hemispheres 6.1
1990 Female, age 91, right hemisphere 5.5
2250 Female, age 67, right hemisphere 5.3
Perirhinal gyrus
nTPM: 7.0
2848 Male, age 76, right hemisphere 8.3
1841 Female, age 85, right hemisphere 8.1
1794 Male, age 80, right hemisphere 7.2
2521 Female, age 94, right hemisphere 6.0
1847 Female, age 91, left hemisphere 5.4
Subiculum
nTPM: 7.2
2438 Female, age 94, left hemisphere 9.3
1901 Male, age 80, both hemispheres 7.7
1977 Female, age 85, both hemispheres 7.1
2619 Male, age 74, both hemispheres 6.7
2042 Male, age 76, both hemispheres 6.5
2729 Female, age 91, right hemisphere 6.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 22.9
Min nTPM: 8.9
Std nTPM: 2.5
Median nTPM: 12.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 22.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 22.4
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 21.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 20.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 19.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 19.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 18.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 18.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 18.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 17.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.3
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 23.6
Min nTPM: 18.5
Sample A Female 21.2
Sample B Female 18.5
Sample C Male 23.4
Sample D Male 23.6
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 21.4
Min nTPM: 18.1
Sample A Female 18.1
Sample B Female 21.0
Sample C Male 18.7
Sample D Male 21.4
Subiculum
nTPM: 18.6
Samples: 4

Max nTPM: 21.8
Min nTPM: 16.4
Sample A Female 21.8
Sample B Female 17.7
Sample C Male 16.4
Sample D Male 18.6
Ventral hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 22.2
Min nTPM: 13.9
Sample A Female 17.7
Sample B Female 19.9
Sample C Male 13.9
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 15.3
Min nTPM: 12.4
Sample A Male 14.6
Sample B Male 15.3
Sample C Female 14.6
Sample D Female 12.4
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 13.9
Sample A Male 13.9
Sample B Male 14.7
Sample C Female 14.9
Sample D Female 16.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68797786 Antisense, RP_050215_01_B07, Mouse strain C57BL/6J (56 days, male) 2.6
73906197 Antisense, RP_051212_04_H04, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.