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NAA38
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:139.4 nTPM
HPA:139.4 nTPM
GTEx:132.5 nTPM
FANTOM5:148.0 Scaled Tags Per Million
Pig:31.6 nTPM
Mouse:38.6 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 139.4
Sample id Sample description nTPM
Hippocampus
nTPM: 134.7
2529 Female, age 94, left hemisphere 141.7
1898 Male, age 80, left hemisphere 140.9
2621 Female, age 67, right hemisphere 134.3
1911 Female, age 85, right hemisphere 130.9
1855 Male, age 76, left hemisphere 130.5
2148 Female, age 91, left hemisphere 129.7
Dentate gyrus
nTPM: 134.5
2530 Female, age 94, left hemisphere 139.5
1927 Female, age 91, both hemispheres 134.9
2528 Male, age 74, both hemispheres 134.4
2246 Female, age 85, both hemispheres 133.9
2531 Female, age 67, both hemispheres 133.8
2010 Male, age 76, both hemispheres 130.7
Entorhinal gyrus
nTPM: 134.1
2764 Male, age 80, right hemisphere 139.6
1787 Male, age 76, left hemisphere 136.9
1938 Female, age 85, left hemisphere 136.1
2117 Female, age 91, right hemisphere 133.5
2613 Female, age 94, left hemisphere 131.7
2686 Male, age 75, right hemisphere 126.4
Hippocampus, CA1
nTPM: 136.8
2749 Male, age 80, left hemisphere 148.9
2045 Male, age 76, both hemispheres 136.0
2527 Male, age 74, both hemispheres 135.4
1873 Female, age 85, both hemispheres 131.8
2082 Female, age 91, right hemisphere 131.6
Hippocampus, CA2
nTPM: 133.5
1892 Male, age 76, both hemispheres 138.6
1963 Male, age 80, left hemisphere 136.5
2249 Male, age 74, both hemispheres 135.0
2437 Female, age 94, left hemisphere 132.7
2113 Female, age 91, right hemisphere 129.8
1940 Female, age 85, left hemisphere 128.7
Hippocampus, CA3
nTPM: 136.1
2137 Male, age 80, left hemisphere 141.0
2436 Male, age 74, both hemispheres 138.6
2620 Female, age 94, left hemisphere 137.9
1867 Male, age 76, both hemispheres 136.3
1891 Female, age 85, both hemispheres 131.5
2861 Female, age 67, both hemispheres 131.3
Parahippocampal cortex
nTPM: 133.8
2250 Female, age 67, right hemisphere 140.9
2245 Female, age 91, both hemispheres 137.5
1933 Female, age 85, both hemispheres 136.8
1850 Male, age 80, both hemispheres 135.2
1990 Female, age 91, right hemisphere 134.9
2532 Female, age 72, left hemisphere 132.9
2018 Male, age 76, both hemispheres 132.3
2693 Female, age 94, both hemispheres 129.8
2692 Male, age 74, both hemispheres 128.7
2622 Female, age 67, right hemisphere 128.5
Perirhinal gyrus
nTPM: 139.4
1794 Male, age 80, right hemisphere 144.9
1847 Female, age 91, left hemisphere 143.3
1841 Female, age 85, right hemisphere 138.8
2848 Male, age 76, right hemisphere 135.2
2521 Female, age 94, right hemisphere 134.6
Subiculum
nTPM: 134.5
1977 Female, age 85, both hemispheres 139.3
2619 Male, age 74, both hemispheres 137.9
1901 Male, age 80, both hemispheres 135.0
2438 Female, age 94, left hemisphere 134.5
2729 Female, age 91, right hemisphere 131.7
2042 Male, age 76, both hemispheres 128.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 132.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 132.5
Samples: 197

Max nTPM: 351.6
Min nTPM: 44.1
Std nTPM: 43.4
Median nTPM: 126.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 351.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 323.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 285.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 277.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 262.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 241.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 226.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 221.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 219.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 216.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 213.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 148.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 148.0
FF:10169-103B7 60 years, female 183.1
FF:10153-102I9 76 years, female 113.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 41.9
Min nTPM: 26.4
Sample A Female 41.9
Sample B Female 28.0
Sample C Male 30.2
Sample D Male 26.4
Entorhinal cortex
nTPM: 25.3
Samples: 4

Max nTPM: 30.1
Min nTPM: 16.0
Sample A Female 26.6
Sample B Female 30.1
Sample C Male 28.3
Sample D Male 16.0
Subiculum
nTPM: 24.8
Samples: 4

Max nTPM: 34.6
Min nTPM: 20.2
Sample A Female 34.6
Sample B Female 21.7
Sample C Male 22.5
Sample D Male 20.2
Ventral hippocampus
nTPM: 27.3
Samples: 4

Max nTPM: 35.0
Min nTPM: 21.6
Sample A Female 25.9
Sample B Female 21.6
Sample C Male 35.0
Sample D Male 26.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.2
Samples: 4

Max nTPM: 33.9
Min nTPM: 30.5
Sample A Male 32.6
Sample B Male 30.5
Sample C Female 33.9
Sample D Female 31.7
Hippocampal formation
nTPM: 38.6
Samples: 4

Max nTPM: 41.8
Min nTPM: 36.1
Sample A Male 39.5
Sample B Male 36.1
Sample C Female 37.0
Sample D Female 41.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.