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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:17.8 nTPM
HPA:17.8 nTPM
GTEx:34.9 nTPM
FANTOM5:48.1 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:24.9 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017911Antibody HPA048803
Glial cells Not detectedNot detected
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.8
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
2621 Female, age 67, right hemisphere 17.1
2529 Female, age 94, left hemisphere 16.6
1898 Male, age 80, left hemisphere 16.4
1911 Female, age 85, right hemisphere 15.0
2148 Female, age 91, left hemisphere 13.5
1855 Male, age 76, left hemisphere 12.9
Dentate gyrus
nTPM: 14.8
2530 Female, age 94, left hemisphere 17.4
1927 Female, age 91, both hemispheres 15.9
2246 Female, age 85, both hemispheres 15.7
2010 Male, age 76, both hemispheres 14.5
2531 Female, age 67, both hemispheres 14.2
2528 Male, age 74, both hemispheres 11.1
Entorhinal gyrus
nTPM: 14.9
1787 Male, age 76, left hemisphere 16.5
1938 Female, age 85, left hemisphere 16.2
2613 Female, age 94, left hemisphere 15.9
2764 Male, age 80, right hemisphere 14.8
2117 Female, age 91, right hemisphere 14.5
2686 Male, age 75, right hemisphere 11.3
Hippocampus, CA1
nTPM: 17.8
2749 Male, age 80, left hemisphere 33.9
2527 Male, age 74, both hemispheres 17.5
1873 Female, age 85, both hemispheres 15.9
2082 Female, age 91, right hemisphere 11.0
2045 Male, age 76, both hemispheres 10.9
Hippocampus, CA2
nTPM: 15.9
1892 Male, age 76, both hemispheres 18.7
1963 Male, age 80, left hemisphere 18.0
2437 Female, age 94, left hemisphere 17.0
1940 Female, age 85, left hemisphere 14.4
2249 Male, age 74, both hemispheres 14.2
2113 Female, age 91, right hemisphere 13.3
Hippocampus, CA3
nTPM: 17.1
2137 Male, age 80, left hemisphere 30.5
1867 Male, age 76, both hemispheres 16.0
2436 Male, age 74, both hemispheres 16.0
1891 Female, age 85, both hemispheres 14.1
2861 Female, age 67, both hemispheres 13.4
2620 Female, age 94, left hemisphere 12.4
Parahippocampal cortex
nTPM: 14.4
2245 Female, age 91, both hemispheres 20.4
2250 Female, age 67, right hemisphere 15.6
2532 Female, age 72, left hemisphere 14.9
1933 Female, age 85, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.1
1850 Male, age 80, both hemispheres 13.9
2018 Male, age 76, both hemispheres 13.4
2622 Female, age 67, right hemisphere 13.3
2692 Male, age 74, both hemispheres 12.2
2693 Female, age 94, both hemispheres 11.8
Perirhinal gyrus
nTPM: 16.4
1794 Male, age 80, right hemisphere 18.8
1847 Female, age 91, left hemisphere 18.8
2521 Female, age 94, right hemisphere 16.6
1841 Female, age 85, right hemisphere 14.2
2848 Male, age 76, right hemisphere 13.6
Subiculum
nTPM: 16.2
1901 Male, age 80, both hemispheres 20.5
2438 Female, age 94, left hemisphere 20.0
1977 Female, age 85, both hemispheres 16.2
2619 Male, age 74, both hemispheres 15.3
2042 Male, age 76, both hemispheres 14.3
2729 Female, age 91, right hemisphere 10.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 119.1
Min nTPM: 6.5
Std nTPM: 19.2
Median nTPM: 31.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 119.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 98.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 94.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 85.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 82.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 82.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 75.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 72.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 72.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 68.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 68.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.1
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 38.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.7
Samples: 4

Max nTPM: 28.0
Min nTPM: 19.9
Sample A Female 28.0
Sample B Female 22.5
Sample C Male 20.5
Sample D Male 19.9
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 22.3
Min nTPM: 17.5
Sample A Female 22.3
Sample B Female 21.8
Sample C Male 18.2
Sample D Male 17.5
Subiculum
nTPM: 19.1
Samples: 4

Max nTPM: 24.9
Min nTPM: 16.3
Sample A Female 24.9
Sample B Female 16.6
Sample C Male 18.5
Sample D Male 16.3
Ventral hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 26.5
Min nTPM: 16.1
Sample A Female 19.7
Sample B Female 16.1
Sample C Male 26.5
Sample D Male 24.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 26.6
Min nTPM: 22.5
Sample A Male 23.3
Sample B Male 25.1
Sample C Female 26.6
Sample D Female 22.5
Hippocampal formation
nTPM: 24.9
Samples: 4

Max nTPM: 26.0
Min nTPM: 23.7
Sample A Male 26.0
Sample B Male 23.7
Sample C Female 24.4
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
564637 Antisense, RP_040826_01_A02, Mouse strain C57BL/6J (56 days, male) 3.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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