ABOUTMENU
HELP
NEWS
CCDC159
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:32.3 nTPM
HPA:32.3 nTPM
GTEx:29.3 nTPM
FANTOM5:41.5 Scaled Tags Per Million
Pig:81.1 nTPM
Mouse:4.9 nTPM
Allen mouse:4.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047126Antibody HPA054655
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 30.6
2148 Female, age 91, left hemisphere 33.7
1855 Male, age 76, left hemisphere 32.3
2529 Female, age 94, left hemisphere 32.2
1911 Female, age 85, right hemisphere 30.2
2621 Female, age 67, right hemisphere 30.0
1898 Male, age 80, left hemisphere 25.0
Dentate gyrus
nTPM: 30.7
2531 Female, age 67, both hemispheres 35.4
2246 Female, age 85, both hemispheres 31.9
2528 Male, age 74, both hemispheres 30.7
2530 Female, age 94, left hemisphere 30.5
2010 Male, age 76, both hemispheres 28.3
1927 Female, age 91, both hemispheres 27.5
Entorhinal gyrus
nTPM: 27.2
2613 Female, age 94, left hemisphere 30.2
2686 Male, age 75, right hemisphere 30.1
2117 Female, age 91, right hemisphere 26.5
1787 Male, age 76, left hemisphere 26.2
2764 Male, age 80, right hemisphere 25.7
1938 Female, age 85, left hemisphere 24.6
Hippocampus, CA1
nTPM: 29.0
2045 Male, age 76, both hemispheres 33.3
2527 Male, age 74, both hemispheres 30.2
1873 Female, age 85, both hemispheres 28.7
2082 Female, age 91, right hemisphere 28.0
2749 Male, age 80, left hemisphere 24.6
Hippocampus, CA2
nTPM: 27.9
2249 Male, age 74, both hemispheres 29.5
2437 Female, age 94, left hemisphere 28.5
1963 Male, age 80, left hemisphere 27.6
1940 Female, age 85, left hemisphere 27.4
2113 Female, age 91, right hemisphere 27.4
1892 Male, age 76, both hemispheres 26.9
Hippocampus, CA3
nTPM: 32.3
2620 Female, age 94, left hemisphere 42.4
2861 Female, age 67, both hemispheres 35.4
1891 Female, age 85, both hemispheres 30.0
2137 Male, age 80, left hemisphere 29.4
2436 Male, age 74, both hemispheres 28.4
1867 Male, age 76, both hemispheres 28.1
Parahippocampal cortex
nTPM: 26.6
2692 Male, age 74, both hemispheres 31.5
2622 Female, age 67, right hemisphere 28.8
2245 Female, age 91, both hemispheres 28.3
2532 Female, age 72, left hemisphere 28.2
1990 Female, age 91, right hemisphere 25.8
2693 Female, age 94, both hemispheres 25.3
2018 Male, age 76, both hemispheres 25.2
1850 Male, age 80, both hemispheres 24.9
2250 Female, age 67, right hemisphere 24.4
1933 Female, age 85, both hemispheres 24.1
Perirhinal gyrus
nTPM: 24.1
2521 Female, age 94, right hemisphere 25.4
2848 Male, age 76, right hemisphere 24.4
1794 Male, age 80, right hemisphere 24.1
1847 Female, age 91, left hemisphere 23.6
1841 Female, age 85, right hemisphere 23.0
Subiculum
nTPM: 29.4
2042 Male, age 76, both hemispheres 31.3
2438 Female, age 94, left hemisphere 30.8
2729 Female, age 91, right hemisphere 30.5
1901 Male, age 80, both hemispheres 29.8
2619 Male, age 74, both hemispheres 28.4
1977 Female, age 85, both hemispheres 25.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.3
Samples: 197

Max nTPM: 77.9
Min nTPM: 12.6
Std nTPM: 9.4
Median nTPM: 28.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 77.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 76.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 55.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 52.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 51.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 51.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 50.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 49.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 48.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 46.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 45.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.5
FF:10153-102I9 76 years, female 46.5
FF:10169-103B7 60 years, female 36.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 81.1
Samples: 4

Max nTPM: 111.1
Min nTPM: 44.6
Sample A Female 111.1
Sample B Female 99.6
Sample C Male 44.6
Sample D Male 69.2
Entorhinal cortex
nTPM: 30.1
Samples: 4

Max nTPM: 37.4
Min nTPM: 23.2
Sample A Female 35.0
Sample B Female 23.2
Sample C Male 37.4
Sample D Male 24.6
Subiculum
nTPM: 39.8
Samples: 4

Max nTPM: 47.3
Min nTPM: 32.2
Sample A Female 44.8
Sample B Female 35.0
Sample C Male 47.3
Sample D Male 32.2
Ventral hippocampus
nTPM: 72.7
Samples: 4

Max nTPM: 126.7
Min nTPM: 37.6
Sample A Female 57.3
Sample B Female 37.6
Sample C Male 69.2
Sample D Male 126.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.9
Samples: 4

Max nTPM: 6.2
Min nTPM: 3.8
Sample A Male 3.8
Sample B Male 5.5
Sample C Female 3.9
Sample D Female 6.2
Hippocampal formation
nTPM: 4.7
Samples: 4

Max nTPM: 6.2
Min nTPM: 3.2
Sample A Male 5.8
Sample B Male 3.4
Sample C Female 3.2
Sample D Female 6.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.9
69854587 Antisense, RP_050324_04_C08, Mouse strain C57BL/6J (56 days, male) 4.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.