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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:29.8 nTPM
HPA:29.8 nTPM
GTEx:26.2 nTPM
FANTOM5:13.5 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:17.6 nTPM
Allen mouse:31.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044968
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
1898 Male, age 80, left hemisphere 26.9
2148 Female, age 91, left hemisphere 26.4
2529 Female, age 94, left hemisphere 26.1
2621 Female, age 67, right hemisphere 25.2
1855 Male, age 76, left hemisphere 23.7
1911 Female, age 85, right hemisphere 21.9
Dentate gyrus
nTPM: 25.9
2531 Female, age 67, both hemispheres 28.1
1927 Female, age 91, both hemispheres 27.2
2010 Male, age 76, both hemispheres 25.6
2246 Female, age 85, both hemispheres 25.6
2528 Male, age 74, both hemispheres 24.6
2530 Female, age 94, left hemisphere 24.4
Entorhinal gyrus
nTPM: 26.0
1787 Male, age 76, left hemisphere 26.7
2686 Male, age 75, right hemisphere 26.6
2764 Male, age 80, right hemisphere 26.6
1938 Female, age 85, left hemisphere 26.4
2613 Female, age 94, left hemisphere 25.8
2117 Female, age 91, right hemisphere 24.0
Hippocampus, CA1
nTPM: 25.7
2045 Male, age 76, both hemispheres 33.0
1873 Female, age 85, both hemispheres 25.2
2082 Female, age 91, right hemisphere 23.7
2527 Male, age 74, both hemispheres 23.6
2749 Male, age 80, left hemisphere 22.8
Hippocampus, CA2
nTPM: 25.3
1892 Male, age 76, both hemispheres 31.9
1940 Female, age 85, left hemisphere 25.5
1963 Male, age 80, left hemisphere 25.0
2437 Female, age 94, left hemisphere 24.5
2113 Female, age 91, right hemisphere 23.0
2249 Male, age 74, both hemispheres 22.1
Hippocampus, CA3
nTPM: 27.1
2620 Female, age 94, left hemisphere 33.4
1867 Male, age 76, both hemispheres 32.1
2861 Female, age 67, both hemispheres 26.9
1891 Female, age 85, both hemispheres 25.6
2436 Male, age 74, both hemispheres 22.8
2137 Male, age 80, left hemisphere 21.9
Parahippocampal cortex
nTPM: 26.3
1850 Male, age 80, both hemispheres 29.4
1933 Female, age 85, both hemispheres 28.6
2532 Female, age 72, left hemisphere 27.1
1990 Female, age 91, right hemisphere 26.9
2693 Female, age 94, both hemispheres 26.7
2622 Female, age 67, right hemisphere 26.6
2245 Female, age 91, both hemispheres 25.3
2250 Female, age 67, right hemisphere 24.3
2692 Male, age 74, both hemispheres 24.1
2018 Male, age 76, both hemispheres 23.8
Perirhinal gyrus
nTPM: 29.8
1794 Male, age 80, right hemisphere 32.2
1841 Female, age 85, right hemisphere 30.8
1847 Female, age 91, left hemisphere 30.5
2848 Male, age 76, right hemisphere 28.7
2521 Female, age 94, right hemisphere 26.9
Subiculum
nTPM: 24.1
1977 Female, age 85, both hemispheres 25.6
2619 Male, age 74, both hemispheres 25.5
1901 Male, age 80, both hemispheres 24.9
2729 Female, age 91, right hemisphere 24.4
2042 Male, age 76, both hemispheres 24.2
2438 Female, age 94, left hemisphere 20.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.2
Samples: 197

Max nTPM: 43.7
Min nTPM: 13.4
Std nTPM: 5.5
Median nTPM: 24.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 43.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 42.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 40.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 40.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 39.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 38.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 37.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 37.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.5
FF:10153-102I9 76 years, female 14.5
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 16.1
Min nTPM: 11.5
Sample A Female 14.0
Sample B Female 12.1
Sample C Male 16.1
Sample D Male 11.5
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.9
Sample A Female 12.4
Sample B Female 14.1
Sample C Male 13.9
Sample D Male 9.9
Subiculum
nTPM: 12.9
Samples: 4

Max nTPM: 15.5
Min nTPM: 11.5
Sample A Female 15.5
Sample B Female 12.7
Sample C Male 12.0
Sample D Male 11.5
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 17.6
Min nTPM: 11.4
Sample A Female 13.0
Sample B Female 11.4
Sample C Male 17.6
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 19.3
Min nTPM: 16.3
Sample A Male 16.3
Sample B Male 17.1
Sample C Female 17.7
Sample D Female 19.3
Hippocampal formation
nTPM: 16.7
Samples: 4

Max nTPM: 18.6
Min nTPM: 15.2
Sample A Male 18.6
Sample B Male 16.1
Sample C Female 16.7
Sample D Female 15.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 31.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 31.6
199201 Antisense, RP_040604_02_D03, Mouse strain C57BL/6J (56 days, male) 31.6

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The Human Protein Atlas

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