ABOUTMENU
HELP
NEWS
CMTM4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:43.1 nTPM
HPA:43.1 nTPM
GTEx:32.5 nTPM
FANTOM5:46.7 Scaled Tags Per Million
Pig:44.8 nTPM
Mouse:44.5 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014704Antibody HPA023890
Glial cells LowNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.1
Sample id Sample description nTPM
Hippocampus
nTPM: 36.6
2148 Female, age 91, left hemisphere 41.3
1898 Male, age 80, left hemisphere 38.5
1911 Female, age 85, right hemisphere 37.8
2529 Female, age 94, left hemisphere 35.5
2621 Female, age 67, right hemisphere 33.8
1855 Male, age 76, left hemisphere 32.6
Dentate gyrus
nTPM: 36.4
2530 Female, age 94, left hemisphere 41.0
1927 Female, age 91, both hemispheres 38.6
2528 Male, age 74, both hemispheres 37.4
2531 Female, age 67, both hemispheres 35.2
2010 Male, age 76, both hemispheres 34.2
2246 Female, age 85, both hemispheres 31.6
Entorhinal gyrus
nTPM: 33.8
1787 Male, age 76, left hemisphere 39.2
2613 Female, age 94, left hemisphere 38.6
1938 Female, age 85, left hemisphere 34.2
2764 Male, age 80, right hemisphere 31.9
2117 Female, age 91, right hemisphere 31.0
2686 Male, age 75, right hemisphere 27.8
Hippocampus, CA1
nTPM: 40.9
2749 Male, age 80, left hemisphere 64.6
1873 Female, age 85, both hemispheres 37.7
2527 Male, age 74, both hemispheres 36.2
2082 Female, age 91, right hemisphere 33.5
2045 Male, age 76, both hemispheres 32.4
Hippocampus, CA2
nTPM: 37.6
1892 Male, age 76, both hemispheres 45.7
1963 Male, age 80, left hemisphere 42.9
2113 Female, age 91, right hemisphere 36.0
2437 Female, age 94, left hemisphere 34.7
2249 Male, age 74, both hemispheres 34.1
1940 Female, age 85, left hemisphere 32.5
Hippocampus, CA3
nTPM: 43.1
2137 Male, age 80, left hemisphere 62.1
1867 Male, age 76, both hemispheres 46.0
2861 Female, age 67, both hemispheres 44.1
2620 Female, age 94, left hemisphere 40.3
1891 Female, age 85, both hemispheres 34.1
2436 Male, age 74, both hemispheres 31.9
Parahippocampal cortex
nTPM: 30.6
2245 Female, age 91, both hemispheres 34.2
1933 Female, age 85, both hemispheres 33.2
2018 Male, age 76, both hemispheres 33.2
1850 Male, age 80, both hemispheres 32.2
1990 Female, age 91, right hemisphere 31.1
2250 Female, age 67, right hemisphere 30.1
2622 Female, age 67, right hemisphere 28.8
2692 Male, age 74, both hemispheres 28.3
2532 Female, age 72, left hemisphere 27.8
2693 Female, age 94, both hemispheres 27.3
Perirhinal gyrus
nTPM: 33.4
1847 Female, age 91, left hemisphere 35.4
2848 Male, age 76, right hemisphere 34.1
1794 Male, age 80, right hemisphere 33.4
2521 Female, age 94, right hemisphere 32.3
1841 Female, age 85, right hemisphere 32.0
Subiculum
nTPM: 33.6
1901 Male, age 80, both hemispheres 40.1
2729 Female, age 91, right hemisphere 38.6
1977 Female, age 85, both hemispheres 33.5
2042 Male, age 76, both hemispheres 33.3
2619 Male, age 74, both hemispheres 28.4
2438 Female, age 94, left hemisphere 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.5
Samples: 197

Max nTPM: 60.6
Min nTPM: 4.5
Std nTPM: 8.3
Median nTPM: 31.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 60.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 55.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 54.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 53.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 52.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 51.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 50.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 49.6
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 49.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 47.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.7
FF:10153-102I9 76 years, female 60.0
FF:10169-103B7 60 years, female 33.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 38.6
Min nTPM: 22.5
Sample A Female 36.0
Sample B Female 32.8
Sample C Male 38.6
Sample D Male 22.5
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 41.3
Min nTPM: 30.0
Sample A Female 31.4
Sample B Female 30.0
Sample C Male 41.3
Sample D Male 30.8
Subiculum
nTPM: 44.8
Samples: 4

Max nTPM: 51.2
Min nTPM: 37.9
Sample A Female 51.2
Sample B Female 45.7
Sample C Male 44.3
Sample D Male 37.9
Ventral hippocampus
nTPM: 35.9
Samples: 4

Max nTPM: 46.7
Min nTPM: 29.2
Sample A Female 34.8
Sample B Female 29.2
Sample C Male 46.7
Sample D Male 33.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.5
Samples: 4

Max nTPM: 54.4
Min nTPM: 40.5
Sample A Male 41.9
Sample B Male 41.0
Sample C Female 40.5
Sample D Female 54.4
Hippocampal formation
nTPM: 28.8
Samples: 4

Max nTPM: 32.6
Min nTPM: 24.4
Sample A Male 32.6
Sample B Male 30.5
Sample C Female 24.4
Sample D Female 27.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
2102 Antisense, RP_040507_02_G09, Mouse strain C57BL/6J (56 days, male) 1.9
2101 Antisense, RP_040507_02_G09, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.