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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:15.0 nTPM
HPA:15.0 nTPM
GTEx:25.7 nTPM
FANTOM5:19.2 Scaled Tags Per Million
Pig:20.4 nTPM
Mouse:7.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043684Antibody HPA063394Antibody CAB046031
Glial cells Not detectedNot detectedLow
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.0
Sample id Sample description nTPM
Hippocampus
nTPM: 9.5
2148 Female, age 91, left hemisphere 16.1
1855 Male, age 76, left hemisphere 11.1
2621 Female, age 67, right hemisphere 10.5
1898 Male, age 80, left hemisphere 10.2
2529 Female, age 94, left hemisphere 4.7
1911 Female, age 85, right hemisphere 4.2
Dentate gyrus
nTPM: 13.7
2531 Female, age 67, both hemispheres 26.7
1927 Female, age 91, both hemispheres 20.6
2010 Male, age 76, both hemispheres 11.1
2246 Female, age 85, both hemispheres 9.0
2528 Male, age 74, both hemispheres 8.4
2530 Female, age 94, left hemisphere 6.5
Entorhinal gyrus
nTPM: 5.3
2613 Female, age 94, left hemisphere 8.8
2686 Male, age 75, right hemisphere 8.7
2764 Male, age 80, right hemisphere 8.0
2117 Female, age 91, right hemisphere 2.8
1938 Female, age 85, left hemisphere 2.4
1787 Male, age 76, left hemisphere 0.9
Hippocampus, CA1
nTPM: 14.4
2045 Male, age 76, both hemispheres 29.5
1873 Female, age 85, both hemispheres 16.1
2749 Male, age 80, left hemisphere 15.8
2527 Male, age 74, both hemispheres 5.9
2082 Female, age 91, right hemisphere 4.8
Hippocampus, CA2
nTPM: 5.9
1892 Male, age 76, both hemispheres 14.9
1963 Male, age 80, left hemisphere 5.8
2437 Female, age 94, left hemisphere 5.6
2113 Female, age 91, right hemisphere 4.1
2249 Male, age 74, both hemispheres 3.3
1940 Female, age 85, left hemisphere 1.8
Hippocampus, CA3
nTPM: 15.0
2620 Female, age 94, left hemisphere 39.2
2861 Female, age 67, both hemispheres 22.0
2137 Male, age 80, left hemisphere 12.4
1867 Male, age 76, both hemispheres 8.4
1891 Female, age 85, both hemispheres 4.2
2436 Male, age 74, both hemispheres 3.8
Parahippocampal cortex
nTPM: 7.3
2693 Female, age 94, both hemispheres 13.9
1850 Male, age 80, both hemispheres 12.4
2245 Female, age 91, both hemispheres 10.8
2622 Female, age 67, right hemisphere 8.9
2692 Male, age 74, both hemispheres 5.8
2532 Female, age 72, left hemisphere 5.5
2250 Female, age 67, right hemisphere 5.3
1933 Female, age 85, both hemispheres 4.4
1990 Female, age 91, right hemisphere 3.6
2018 Male, age 76, both hemispheres 2.8
Perirhinal gyrus
nTPM: 10.7
1794 Male, age 80, right hemisphere 16.5
2848 Male, age 76, right hemisphere 12.3
1841 Female, age 85, right hemisphere 8.7
2521 Female, age 94, right hemisphere 8.7
1847 Female, age 91, left hemisphere 7.1
Subiculum
nTPM: 4.8
2729 Female, age 91, right hemisphere 9.7
2438 Female, age 94, left hemisphere 5.5
1901 Male, age 80, both hemispheres 5.0
2619 Male, age 74, both hemispheres 4.1
2042 Male, age 76, both hemispheres 2.8
1977 Female, age 85, both hemispheres 1.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.7
Samples: 197

Max nTPM: 94.2
Min nTPM: 2.4
Std nTPM: 20.3
Median nTPM: 19.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 94.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 92.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 92.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 89.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 87.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 86.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 78.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 74.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 73.4
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 64.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 63.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.2
FF:10169-103B7 60 years, female 32.4
FF:10153-102I9 76 years, female 6.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 24.2
Min nTPM: 17.1
Sample A Female 24.2
Sample B Female 21.2
Sample C Male 17.1
Sample D Male 19.0
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 14.4
Min nTPM: 11.6
Sample A Female 14.2
Sample B Female 14.4
Sample C Male 13.7
Sample D Male 11.6
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 18.9
Min nTPM: 11.2
Sample A Female 18.9
Sample B Female 13.1
Sample C Male 14.3
Sample D Male 11.2
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 21.1
Min nTPM: 13.4
Sample A Female 16.5
Sample B Female 13.4
Sample C Male 21.1
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.4
Sample A Male 7.0
Sample B Male 6.8
Sample C Female 6.2
Sample D Female 5.4
Hippocampal formation
nTPM: 7.7
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.8
Sample A Male 7.3
Sample B Male 8.1
Sample C Female 8.7
Sample D Female 6.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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