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BTBD9
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:18.8 nTPM
HPA:18.8 nTPM
GTEx:10.1 nTPM
FANTOM5:48.8 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:35.6 nTPM
Allen mouse:13.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041930
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.8
Sample id Sample description nTPM
Hippocampus
nTPM: 12.7
2148 Female, age 91, left hemisphere 18.7
1898 Male, age 80, left hemisphere 16.0
2621 Female, age 67, right hemisphere 14.1
1855 Male, age 76, left hemisphere 10.9
1911 Female, age 85, right hemisphere 9.5
2529 Female, age 94, left hemisphere 7.2
Dentate gyrus
nTPM: 16.6
2531 Female, age 67, both hemispheres 32.4
1927 Female, age 91, both hemispheres 16.5
2010 Male, age 76, both hemispheres 14.9
2528 Male, age 74, both hemispheres 14.4
2246 Female, age 85, both hemispheres 13.4
2530 Female, age 94, left hemisphere 8.0
Entorhinal gyrus
nTPM: 9.5
2764 Male, age 80, right hemisphere 11.4
1787 Male, age 76, left hemisphere 10.3
2686 Male, age 75, right hemisphere 9.9
1938 Female, age 85, left hemisphere 9.6
2613 Female, age 94, left hemisphere 9.1
2117 Female, age 91, right hemisphere 6.3
Hippocampus, CA1
nTPM: 14.9
2045 Male, age 76, both hemispheres 20.3
1873 Female, age 85, both hemispheres 18.1
2082 Female, age 91, right hemisphere 12.7
2749 Male, age 80, left hemisphere 12.5
2527 Male, age 74, both hemispheres 11.2
Hippocampus, CA2
nTPM: 11.3
1892 Male, age 76, both hemispheres 18.9
1963 Male, age 80, left hemisphere 15.0
2113 Female, age 91, right hemisphere 11.4
1940 Female, age 85, left hemisphere 8.7
2437 Female, age 94, left hemisphere 8.0
2249 Male, age 74, both hemispheres 5.5
Hippocampus, CA3
nTPM: 18.8
2620 Female, age 94, left hemisphere 37.7
2861 Female, age 67, both hemispheres 30.9
2137 Male, age 80, left hemisphere 15.0
2436 Male, age 74, both hemispheres 10.0
1891 Female, age 85, both hemispheres 9.9
1867 Male, age 76, both hemispheres 9.5
Parahippocampal cortex
nTPM: 10.0
2693 Female, age 94, both hemispheres 14.3
1933 Female, age 85, both hemispheres 13.2
2245 Female, age 91, both hemispheres 13.2
1850 Male, age 80, both hemispheres 12.6
2250 Female, age 67, right hemisphere 9.8
2622 Female, age 67, right hemisphere 8.5
2018 Male, age 76, both hemispheres 8.3
1990 Female, age 91, right hemisphere 8.1
2692 Male, age 74, both hemispheres 6.7
2532 Female, age 72, left hemisphere 5.2
Perirhinal gyrus
nTPM: 16.6
1794 Male, age 80, right hemisphere 17.1
2521 Female, age 94, right hemisphere 17.1
1847 Female, age 91, left hemisphere 16.9
2848 Male, age 76, right hemisphere 16.9
1841 Female, age 85, right hemisphere 15.0
Subiculum
nTPM: 7.9
2729 Female, age 91, right hemisphere 17.0
1977 Female, age 85, both hemispheres 11.2
2619 Male, age 74, both hemispheres 5.6
2042 Male, age 76, both hemispheres 4.7
2438 Female, age 94, left hemisphere 4.6
1901 Male, age 80, both hemispheres 4.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 26.6
Min nTPM: 2.9
Std nTPM: 4.5
Median nTPM: 9.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 22.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 21.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 20.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 19.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 19.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 18.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 18.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 18.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 18.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.8
FF:10169-103B7 60 years, female 59.6
FF:10153-102I9 76 years, female 37.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.8
Samples: 4

Max nTPM: 19.7
Min nTPM: 13.0
Sample A Female 15.4
Sample B Female 19.7
Sample C Male 13.0
Sample D Male 19.2
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 18.5
Min nTPM: 15.3
Sample A Female 18.5
Sample B Female 15.3
Sample C Male 18.3
Sample D Male 18.1
Subiculum
nTPM: 17.4
Samples: 4

Max nTPM: 18.8
Min nTPM: 14.9
Sample A Female 18.3
Sample B Female 18.8
Sample C Male 17.4
Sample D Male 14.9
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 18.7
Min nTPM: 16.2
Sample A Female 16.3
Sample B Female 18.7
Sample C Male 16.2
Sample D Male 18.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.9
Samples: 4

Max nTPM: 28.7
Min nTPM: 21.2
Sample A Male 23.9
Sample B Male 21.2
Sample C Female 28.7
Sample D Female 25.8
Hippocampal formation
nTPM: 35.6
Samples: 4

Max nTPM: 41.4
Min nTPM: 30.4
Sample A Male 30.4
Sample B Male 41.4
Sample C Female 38.2
Sample D Female 32.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.1
69015194 Antisense, RP_050310_02_E03, Mouse strain C57BL/6J (56 days, male) 13.1

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The Human Protein Atlas

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