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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:39.3 nTPM
HPA:39.3 nTPM
GTEx:25.7 nTPM
FANTOM5:44.8 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:9.6 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054112
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.3
Sample id Sample description nTPM
Hippocampus
nTPM: 39.3
2529 Female, age 94, left hemisphere 55.4
1911 Female, age 85, right hemisphere 40.9
1855 Male, age 76, left hemisphere 36.8
2621 Female, age 67, right hemisphere 35.0
1898 Male, age 80, left hemisphere 34.7
2148 Female, age 91, left hemisphere 33.2
Dentate gyrus
nTPM: 33.1
2530 Female, age 94, left hemisphere 38.7
2528 Male, age 74, both hemispheres 36.4
2246 Female, age 85, both hemispheres 35.0
2010 Male, age 76, both hemispheres 34.4
2531 Female, age 67, both hemispheres 32.5
1927 Female, age 91, both hemispheres 21.9
Entorhinal gyrus
nTPM: 32.9
2117 Female, age 91, right hemisphere 43.4
2686 Male, age 75, right hemisphere 35.5
1787 Male, age 76, left hemisphere 34.0
2764 Male, age 80, right hemisphere 33.4
1938 Female, age 85, left hemisphere 25.4
2613 Female, age 94, left hemisphere 25.4
Hippocampus, CA1
nTPM: 30.6
2527 Male, age 74, both hemispheres 37.2
1873 Female, age 85, both hemispheres 35.3
2082 Female, age 91, right hemisphere 32.1
2045 Male, age 76, both hemispheres 26.7
2749 Male, age 80, left hemisphere 21.9
Hippocampus, CA2
nTPM: 31.4
2249 Male, age 74, both hemispheres 35.6
2437 Female, age 94, left hemisphere 34.7
2113 Female, age 91, right hemisphere 32.7
1940 Female, age 85, left hemisphere 31.9
1963 Male, age 80, left hemisphere 31.4
1892 Male, age 76, both hemispheres 22.1
Hippocampus, CA3
nTPM: 33.0
2620 Female, age 94, left hemisphere 43.5
2861 Female, age 67, both hemispheres 40.6
1891 Female, age 85, both hemispheres 40.5
2436 Male, age 74, both hemispheres 27.3
1867 Male, age 76, both hemispheres 25.5
2137 Male, age 80, left hemisphere 20.2
Parahippocampal cortex
nTPM: 29.0
2692 Male, age 74, both hemispheres 41.9
2622 Female, age 67, right hemisphere 32.1
2532 Female, age 72, left hemisphere 29.4
1990 Female, age 91, right hemisphere 28.4
2245 Female, age 91, both hemispheres 28.2
2018 Male, age 76, both hemispheres 28.0
1850 Male, age 80, both hemispheres 26.1
1933 Female, age 85, both hemispheres 26.1
2250 Female, age 67, right hemisphere 25.4
2693 Female, age 94, both hemispheres 24.2
Perirhinal gyrus
nTPM: 23.5
2848 Male, age 76, right hemisphere 28.2
1794 Male, age 80, right hemisphere 24.6
2521 Female, age 94, right hemisphere 23.8
1841 Female, age 85, right hemisphere 21.4
1847 Female, age 91, left hemisphere 19.5
Subiculum
nTPM: 38.4
2042 Male, age 76, both hemispheres 49.0
2619 Male, age 74, both hemispheres 42.8
2438 Female, age 94, left hemisphere 36.8
2729 Female, age 91, right hemisphere 36.4
1901 Male, age 80, both hemispheres 35.6
1977 Female, age 85, both hemispheres 30.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.7
Samples: 197

Max nTPM: 75.1
Min nTPM: 10.0
Std nTPM: 9.9
Median nTPM: 24.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 75.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 65.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 58.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 48.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 48.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 47.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 45.5
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 45.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 44.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 44.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 43.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.8
FF:10153-102I9 76 years, female 67.7
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.0
Samples: 4

Max nTPM: 32.6
Min nTPM: 16.9
Sample A Female 25.9
Sample B Female 20.7
Sample C Male 32.6
Sample D Male 16.9
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 24.4
Min nTPM: 17.3
Sample A Female 24.4
Sample B Female 17.3
Sample C Male 24.4
Sample D Male 20.7
Subiculum
nTPM: 26.5
Samples: 4

Max nTPM: 29.1
Min nTPM: 23.4
Sample A Female 29.1
Sample B Female 23.4
Sample C Male 28.0
Sample D Male 25.3
Ventral hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 40.0
Min nTPM: 20.0
Sample A Female 23.8
Sample B Female 20.0
Sample C Male 40.0
Sample D Male 24.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.3
Sample A Male 8.3
Sample B Male 9.1
Sample C Female 7.3
Sample D Female 9.2
Hippocampal formation
nTPM: 9.7
Samples: 4

Max nTPM: 10.5
Min nTPM: 8.0
Sample A Male 8.0
Sample B Male 9.7
Sample C Female 10.5
Sample D Female 10.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
77340500 Antisense, RP_070116_02_D10, Mouse strain C57BL/6J (56 days, male) 0.9
71763906 Antisense, RP_050921_02_G12, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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