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DENND5A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:65.1 nTPM
HPA:65.1 nTPM
GTEx:88.8 nTPM
FANTOM5:86.9 Scaled Tags Per Million
Pig:90.0 nTPM
Mouse:125.7 nTPM
Allen mouse:6.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052923Antibody HPA055009
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.1
Sample id Sample description nTPM
Hippocampus
nTPM: 62.6
2529 Female, age 94, left hemisphere 68.3
1898 Male, age 80, left hemisphere 65.4
2621 Female, age 67, right hemisphere 64.1
1911 Female, age 85, right hemisphere 63.4
2148 Female, age 91, left hemisphere 59.8
1855 Male, age 76, left hemisphere 54.9
Dentate gyrus
nTPM: 58.6
2530 Female, age 94, left hemisphere 65.8
2528 Male, age 74, both hemispheres 61.6
2010 Male, age 76, both hemispheres 58.5
2531 Female, age 67, both hemispheres 56.8
1927 Female, age 91, both hemispheres 56.1
2246 Female, age 85, both hemispheres 52.8
Entorhinal gyrus
nTPM: 63.5
2117 Female, age 91, right hemisphere 76.5
2686 Male, age 75, right hemisphere 68.5
1938 Female, age 85, left hemisphere 64.7
2764 Male, age 80, right hemisphere 60.5
1787 Male, age 76, left hemisphere 57.5
2613 Female, age 94, left hemisphere 53.5
Hippocampus, CA1
nTPM: 57.8
2527 Male, age 74, both hemispheres 64.0
2749 Male, age 80, left hemisphere 60.7
1873 Female, age 85, both hemispheres 59.7
2082 Female, age 91, right hemisphere 55.4
2045 Male, age 76, both hemispheres 49.0
Hippocampus, CA2
nTPM: 59.7
1963 Male, age 80, left hemisphere 68.5
1892 Male, age 76, both hemispheres 61.0
2437 Female, age 94, left hemisphere 59.5
2249 Male, age 74, both hemispheres 56.5
1940 Female, age 85, left hemisphere 56.4
2113 Female, age 91, right hemisphere 56.3
Hippocampus, CA3
nTPM: 58.4
1891 Female, age 85, both hemispheres 63.0
1867 Male, age 76, both hemispheres 62.2
2137 Male, age 80, left hemisphere 60.5
2436 Male, age 74, both hemispheres 55.6
2861 Female, age 67, both hemispheres 55.3
2620 Female, age 94, left hemisphere 54.1
Parahippocampal cortex
nTPM: 59.1
2692 Male, age 74, both hemispheres 70.3
1850 Male, age 80, both hemispheres 66.0
1990 Female, age 91, right hemisphere 61.7
2693 Female, age 94, both hemispheres 58.2
2018 Male, age 76, both hemispheres 56.8
2245 Female, age 91, both hemispheres 56.8
2622 Female, age 67, right hemisphere 56.4
1933 Female, age 85, both hemispheres 56.1
2532 Female, age 72, left hemisphere 55.8
2250 Female, age 67, right hemisphere 53.4
Perirhinal gyrus
nTPM: 57.3
1847 Female, age 91, left hemisphere 62.8
1841 Female, age 85, right hemisphere 61.3
1794 Male, age 80, right hemisphere 59.7
2521 Female, age 94, right hemisphere 53.4
2848 Male, age 76, right hemisphere 49.4
Subiculum
nTPM: 65.1
2619 Male, age 74, both hemispheres 70.2
1901 Male, age 80, both hemispheres 69.1
2042 Male, age 76, both hemispheres 63.9
1977 Female, age 85, both hemispheres 63.3
2729 Female, age 91, right hemisphere 62.9
2438 Female, age 94, left hemisphere 61.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.8
Samples: 197

Max nTPM: 200.7
Min nTPM: 25.2
Std nTPM: 32.8
Median nTPM: 84.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 200.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 178.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 176.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 174.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 163.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 161.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 160.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 154.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 154.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 152.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 152.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.9
FF:10153-102I9 76 years, female 95.4
FF:10169-103B7 60 years, female 78.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 90.0
Samples: 4

Max nTPM: 112.9
Min nTPM: 58.5
Sample A Female 112.9
Sample B Female 82.6
Sample C Male 106.1
Sample D Male 58.5
Entorhinal cortex
nTPM: 87.6
Samples: 4

Max nTPM: 98.9
Min nTPM: 75.8
Sample A Female 83.4
Sample B Female 92.1
Sample C Male 98.9
Sample D Male 75.8
Subiculum
nTPM: 77.3
Samples: 4

Max nTPM: 97.3
Min nTPM: 62.6
Sample A Female 97.3
Sample B Female 75.7
Sample C Male 73.5
Sample D Male 62.6
Ventral hippocampus
nTPM: 85.6
Samples: 4

Max nTPM: 107.4
Min nTPM: 65.4
Sample A Female 74.2
Sample B Female 65.4
Sample C Male 107.4
Sample D Male 95.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 125.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.6
Samples: 4

Max nTPM: 137.9
Min nTPM: 118.4
Sample A Male 137.9
Sample B Male 123.0
Sample C Female 123.1
Sample D Female 118.4
Hippocampal formation
nTPM: 125.7
Samples: 4

Max nTPM: 140.3
Min nTPM: 115.7
Sample A Male 119.9
Sample B Male 127.0
Sample C Female 140.3
Sample D Female 115.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.2
1527 Antisense, RP_Baylor_253965, Mouse strain C57BL/6J (56 days, male) 6.2
1526 Antisense, RP_Baylor_253965, Mouse strain C57BL/6J (56 days, male) 3.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.