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KCNQ3
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.2 nTPM
HPA:21.2 nTPM
GTEx:14.3 nTPM
FANTOM5:25.3 Scaled Tags Per Million
Pig:45.3 nTPM
Mouse:46.5 nTPM
Allen mouse:8.9 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 21.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4.1
2846 Female, age 79, unknown 15.9
1781 Male, age 74, unknown 7.1
2290 Female, age 72, unknown 4.7
1857 Female, age 85, left hemisphere 3.8
1854 Male, age 80, left hemisphere 1.7
2288 Male, age 75, left hemisphere 0.0
2289 Male, age 61, right hemisphere 0.0
2481 Female, age 94, left hemisphere 0.0
Claustrum
nTPM: 21.2
2568 Male, age 61, both hemispheres 40.6
2284 Female, age 91, both hemispheres 32.8
2645 Female, age 72, unknown 29.0
2198 Male, age 80, both hemispheres 25.1
2491 Male, age 75, both hemispheres 17.9
2392 Female, age 94, both hemispheres 15.5
1956 Male, age 74, unknown 10.8
2196 Female, age 79, unknown 10.1
2292 Female, age 85, both hemispheres 9.2
Globus pallidus, externus
nTPM: 0.0
1996 Male, age 80, right hemisphere 0.0
2395 Male, age 75, both hemispheres 0.0
2567 Female, age 72, unknown 0.0
2646 Male, age 61, right hemisphere 0.0
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 0.0
1818 Male, age 74, unknown 0.0
2037 Male, age 80, right hemisphere 0.0
2111 Female, age 85, right hemisphere 0.0
2287 Male, age 75, right hemisphere 0.0
2483 Female, age 94, right hemisphere 0.0
2566 Female, age 72, unknown 0.0
2778 Female, age 91, both hemispheres 0.0
Nucleus accumbens
nTPM: 3.5
1856 Female, age 91, right hemisphere 10.2
1783 Male, age 74, unknown 9.3
2824 Male, age 61, right hemisphere 8.3
1806 Female, age 85, left hemisphere 0.0
2286 Male, age 75, left hemisphere 0.0
2391 Female, age 94, left hemisphere 0.0
2698 Female, age 72, unknown 0.0
2732 Male, age 80, right hemisphere 0.0
Nucleus basalis of Meynert
nTPM: 0.1
2393 Male, age 80, right hemisphere 0.6
2484 Female, age 94, left hemisphere 0.0
2569 Male, age 61, both hemispheres 0.0
2821 Male, age 75, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 5.1
2029 Male, age 61, right hemisphere 9.7
2195 Female, age 85, both hemispheres 6.6
2775 Male, age 80, right hemisphere 6.5
1812 Female, age 91, both hemispheres 2.4
1979 Male, age 74, unknown 0.0
Olfactory tubercle
nTPM: 13.6
1998 Female, age 91, both hemispheres 20.0
2487 Female, age 94, left hemisphere 14.7
2856 Male, age 75, right hemisphere 14.1
1846 Male, age 80, right hemisphere 5.5
Putamen
nTPM: 5.0
2466 Female, age 79, unknown 15.1
1829 Male, age 74, unknown 8.2
1838 Male, age 80, right hemisphere 5.8
1937 Female, age 91, right hemisphere 3.4
2489 Female, age 72, unknown 2.3
2482 Female, age 94, left hemisphere 0.0
2647 Male, age 75, left hemisphere 0.0
Septal nuclei
nTPM: 3.5
1960 Male, age 74, unknown 9.1
2629 Female, age 94, right hemisphere 8.5
2031 Female, age 72, unknown 5.6
2059 Female, age 85, both hemispheres 1.6
2009 Female, age 91, both hemispheres 0.0
2199 Male, age 80, right hemisphere 0.0
2394 Male, age 61, left hemisphere 0.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 14.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 12.6
Samples: 246

Max nTPM: 48.1
Min nTPM: 1.6
Std nTPM: 7.7
Median nTPM: 11.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 48.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 35.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 33.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 32.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 32.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 31.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 30.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 29.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 28.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 28.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 28.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 14.3
Samples: 246

Max nTPM: 37.2
Min nTPM: 1.2
Std nTPM: 7.2
Median nTPM: 14.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 37.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 35.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 35.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 32.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 31.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 30.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 29.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 28.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 27.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 27.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 27.0
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Brain - Putamen (basal ganglia)
Average nTPM: 11.2
Samples: 205

Max nTPM: 35.8
Min nTPM: 1.3
Std nTPM: 7.4
Median nTPM: 9.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 35.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 34.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 33.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 31.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 30.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 30.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 28.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 28.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 27.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 26.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 26.0
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.3
FF:10164-103B2 76 years, female 25.3
Globus pallidus
Scaled Tags Per Million: 9.0
FF:10161-103A8 76 years, female 9.3
FF:10175-103C4 60 years, female 8.6
Nucleus accumbens
Scaled Tags Per Million: 17.9
FF:10037-101F1 23-56 years, mixed 17.9
Putamen
Scaled Tags Per Million: 21.7
FF:10176-103C5 60 years, female 21.7

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 45.3
Pig sample Sample description nTPM
Caudate
nTPM: 38.9
Samples: 4

Max nTPM: 52.1
Min nTPM: 20.5
Sample A Female 20.5
Sample B Female 41.0
Sample C Male 52.1
Sample D Male 41.8
Putamen
nTPM: 45.3
Samples: 4

Max nTPM: 67.4
Min nTPM: 12.2
Sample A Female 12.2
Sample B Female 52.4
Sample C Male 67.4
Sample D Male 49.1
Septum
nTPM: 14.5
Samples: 4

Max nTPM: 18.2
Min nTPM: 4.6
Sample A Female 17.1
Sample B Female 18.2
Sample C Male 18.1
Sample D Male 4.6
Ventral pallidum
nTPM: 24.7
Samples: 4

Max nTPM: 27.6
Min nTPM: 19.3
Sample A Female 27.3
Sample B Female 19.3
Sample C Male 27.6
Sample D Male 24.7

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 46.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 46.5
Samples: 4

Max nTPM: 50.7
Min nTPM: 41.7
Sample A Male 48.4
Sample B Male 50.7
Sample C Female 41.7
Sample D Female 45.1
Septum
nTPM: 11.1
Samples: 4

Max nTPM: 14.1
Min nTPM: 8.6
Sample A Male 14.1
Sample B Male 8.6
Sample C Female 9.7
Sample D Female 11.9
Ventral forebrain
nTPM: 31.3
Samples: 4

Max nTPM: 34.1
Min nTPM: 28.2
Sample A Male 32.1
Sample B Male 34.1
Sample C Female 28.2
Sample D Female 30.8

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.9
69258077 Antisense, RP_050331_03_G05, Mouse strain C57BL/6J (56 days, male) 8.9
70562114 Antisense, RP_050331_03_G05, Mouse strain C57BL/6J (56 days, male) 8.0
Pallidum
Expression energy: 3.1
69258077 Antisense, RP_050331_03_G05, Mouse strain C57BL/6J (56 days, male) 3.1
70562114 Antisense, RP_050331_03_G05, Mouse strain C57BL/6J (56 days, male) 2.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.