ABOUTMENU
HELP
NEWS
CMSS1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.8 nTPM
HPA:21.8 nTPM
GTEx:28.4 nTPM
FANTOM5:88.5 Scaled Tags Per Million
Pig:18.9 nTPM
Mouse:21.2 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042820
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.8
Sample id Sample description nTPM
Hippocampus
nTPM: 18.1
2148 Female, age 91, left hemisphere 21.8
1911 Female, age 85, right hemisphere 19.3
2621 Female, age 67, right hemisphere 17.5
1855 Male, age 76, left hemisphere 16.9
1898 Male, age 80, left hemisphere 16.5
2529 Female, age 94, left hemisphere 16.5
Dentate gyrus
nTPM: 19.8
2531 Female, age 67, both hemispheres 23.5
2246 Female, age 85, both hemispheres 21.2
2528 Male, age 74, both hemispheres 20.0
1927 Female, age 91, both hemispheres 19.9
2010 Male, age 76, both hemispheres 17.8
2530 Female, age 94, left hemisphere 16.3
Entorhinal gyrus
nTPM: 20.9
2613 Female, age 94, left hemisphere 23.3
2764 Male, age 80, right hemisphere 21.6
1938 Female, age 85, left hemisphere 21.2
1787 Male, age 76, left hemisphere 20.6
2686 Male, age 75, right hemisphere 20.3
2117 Female, age 91, right hemisphere 18.5
Hippocampus, CA1
nTPM: 19.7
2082 Female, age 91, right hemisphere 21.2
2749 Male, age 80, left hemisphere 20.0
2045 Male, age 76, both hemispheres 19.3
1873 Female, age 85, both hemispheres 19.0
2527 Male, age 74, both hemispheres 18.9
Hippocampus, CA2
nTPM: 18.3
1892 Male, age 76, both hemispheres 20.3
2113 Female, age 91, right hemisphere 19.4
1940 Female, age 85, left hemisphere 18.0
2249 Male, age 74, both hemispheres 17.8
1963 Male, age 80, left hemisphere 17.7
2437 Female, age 94, left hemisphere 16.4
Hippocampus, CA3
nTPM: 20.6
2620 Female, age 94, left hemisphere 25.7
2137 Male, age 80, left hemisphere 22.4
2861 Female, age 67, both hemispheres 20.5
1891 Female, age 85, both hemispheres 19.2
1867 Male, age 76, both hemispheres 18.1
2436 Male, age 74, both hemispheres 18.0
Parahippocampal cortex
nTPM: 21.1
2693 Female, age 94, both hemispheres 23.9
2622 Female, age 67, right hemisphere 22.4
2532 Female, age 72, left hemisphere 22.3
1850 Male, age 80, both hemispheres 21.5
2245 Female, age 91, both hemispheres 21.1
1933 Female, age 85, both hemispheres 21.0
2692 Male, age 74, both hemispheres 20.8
1990 Female, age 91, right hemisphere 20.5
2250 Female, age 67, right hemisphere 19.7
2018 Male, age 76, both hemispheres 17.7
Perirhinal gyrus
nTPM: 21.8
2521 Female, age 94, right hemisphere 22.5
2848 Male, age 76, right hemisphere 22.5
1794 Male, age 80, right hemisphere 21.6
1847 Female, age 91, left hemisphere 21.4
1841 Female, age 85, right hemisphere 21.1
Subiculum
nTPM: 19.0
1977 Female, age 85, both hemispheres 21.6
2619 Male, age 74, both hemispheres 19.8
1901 Male, age 80, both hemispheres 19.2
2729 Female, age 91, right hemisphere 19.2
2042 Male, age 76, both hemispheres 17.2
2438 Female, age 94, left hemisphere 16.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.4
Samples: 197

Max nTPM: 60.6
Min nTPM: 10.3
Std nTPM: 9.9
Median nTPM: 26.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 60.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 59.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 58.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 56.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 53.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 52.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 48.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 48.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 46.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 45.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 45.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.5
FF:10169-103B7 60 years, female 124.5
FF:10153-102I9 76 years, female 52.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 20.4
Min nTPM: 16.0
Sample A Female 20.4
Sample B Female 18.7
Sample C Male 16.0
Sample D Male 16.8
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 20.4
Min nTPM: 17.8
Sample A Female 18.8
Sample B Female 20.4
Sample C Male 17.8
Sample D Male 18.4
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 17.9
Min nTPM: 15.0
Sample A Female 17.9
Sample B Female 16.1
Sample C Male 15.0
Sample D Male 15.6
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 19.3
Min nTPM: 13.1
Sample A Female 15.8
Sample B Female 14.8
Sample C Male 13.1
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 23.2
Min nTPM: 19.5
Sample A Male 19.6
Sample B Male 23.2
Sample C Female 19.7
Sample D Female 19.5
Hippocampal formation
nTPM: 21.2
Samples: 4

Max nTPM: 22.6
Min nTPM: 18.9
Sample A Male 22.6
Sample B Male 18.9
Sample C Female 22.3
Sample D Female 21.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68545953 Antisense, RP_050120_01_G08, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.