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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:58.3 nTPM
HPA:58.3 nTPM
GTEx:59.4 nTPM
FANTOM5:20.3 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:12.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040232
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.3
Sample id Sample description nTPM
Hippocampus
nTPM: 54.9
2529 Female, age 94, left hemisphere 59.3
2621 Female, age 67, right hemisphere 59.3
2148 Female, age 91, left hemisphere 56.2
1911 Female, age 85, right hemisphere 54.7
1898 Male, age 80, left hemisphere 50.3
1855 Male, age 76, left hemisphere 49.7
Dentate gyrus
nTPM: 53.9
2530 Female, age 94, left hemisphere 64.1
2531 Female, age 67, both hemispheres 58.2
2010 Male, age 76, both hemispheres 51.3
2246 Female, age 85, both hemispheres 51.1
2528 Male, age 74, both hemispheres 50.0
1927 Female, age 91, both hemispheres 48.9
Entorhinal gyrus
nTPM: 58.3
2686 Male, age 75, right hemisphere 66.8
2117 Female, age 91, right hemisphere 63.5
2764 Male, age 80, right hemisphere 58.2
2613 Female, age 94, left hemisphere 56.7
1938 Female, age 85, left hemisphere 53.1
1787 Male, age 76, left hemisphere 51.4
Hippocampus, CA1
nTPM: 49.7
2082 Female, age 91, right hemisphere 54.4
1873 Female, age 85, both hemispheres 52.0
2527 Male, age 74, both hemispheres 50.3
2749 Male, age 80, left hemisphere 46.9
2045 Male, age 76, both hemispheres 45.1
Hippocampus, CA2
nTPM: 53.5
1963 Male, age 80, left hemisphere 60.1
2437 Female, age 94, left hemisphere 55.7
2113 Female, age 91, right hemisphere 54.9
1940 Female, age 85, left hemisphere 53.2
2249 Male, age 74, both hemispheres 50.1
1892 Male, age 76, both hemispheres 47.0
Hippocampus, CA3
nTPM: 50.9
2861 Female, age 67, both hemispheres 57.4
1891 Female, age 85, both hemispheres 56.7
1867 Male, age 76, both hemispheres 49.9
2620 Female, age 94, left hemisphere 48.8
2137 Male, age 80, left hemisphere 47.2
2436 Male, age 74, both hemispheres 45.3
Parahippocampal cortex
nTPM: 53.3
2692 Male, age 74, both hemispheres 59.3
2532 Female, age 72, left hemisphere 57.5
2622 Female, age 67, right hemisphere 56.9
1990 Female, age 91, right hemisphere 55.6
2245 Female, age 91, both hemispheres 54.9
1850 Male, age 80, both hemispheres 51.5
2018 Male, age 76, both hemispheres 51.0
1933 Female, age 85, both hemispheres 50.0
2693 Female, age 94, both hemispheres 48.3
2250 Female, age 67, right hemisphere 48.1
Perirhinal gyrus
nTPM: 48.5
1847 Female, age 91, left hemisphere 49.8
1794 Male, age 80, right hemisphere 49.2
2848 Male, age 76, right hemisphere 49.1
1841 Female, age 85, right hemisphere 48.3
2521 Female, age 94, right hemisphere 46.2
Subiculum
nTPM: 56.8
2438 Female, age 94, left hemisphere 60.7
2042 Male, age 76, both hemispheres 59.8
1977 Female, age 85, both hemispheres 58.1
1901 Male, age 80, both hemispheres 56.1
2619 Male, age 74, both hemispheres 54.1
2729 Female, age 91, right hemisphere 52.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.4
Samples: 197

Max nTPM: 191.1
Min nTPM: 8.8
Std nTPM: 34.4
Median nTPM: 50.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 191.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 189.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 183.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 167.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 151.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 147.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 142.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 135.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 134.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 134.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 129.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.3
FF:10153-102I9 76 years, female 29.2
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 20.9
Min nTPM: 9.0
Sample A Female 20.9
Sample B Female 13.7
Sample C Male 19.9
Sample D Male 9.0
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 14.9
Min nTPM: 10.6
Sample A Female 10.6
Sample B Female 14.1
Sample C Male 14.9
Sample D Male 11.5
Subiculum
nTPM: 13.7
Samples: 4

Max nTPM: 18.4
Min nTPM: 10.8
Sample A Female 18.4
Sample B Female 14.2
Sample C Male 11.5
Sample D Male 10.8
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.1
Sample A Female 13.0
Sample B Female 11.1
Sample C Male 17.1
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.1
Sample A Male 11.1
Sample B Male 10.0
Sample C Female 10.8
Sample D Female 9.1
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 14.3
Min nTPM: 10.3
Sample A Male 10.3
Sample B Male 11.0
Sample C Female 14.3
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69289399 Antisense, RP_050407_03_B05, Mouse strain C57BL/6J (56 days, male) 0.1

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