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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:117.4 nTPM
HPA:117.4 nTPM
GTEx:114.7 nTPM
FANTOM5:77.3 Scaled Tags Per Million
Mouse:142.1 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011055
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 117.4
Sample id Sample description nTPM
Hippocampus
nTPM: 110.4
1898 Male, age 80, left hemisphere 127.6
2148 Female, age 91, left hemisphere 119.1
1855 Male, age 76, left hemisphere 110.4
2621 Female, age 67, right hemisphere 106.8
2529 Female, age 94, left hemisphere 101.2
1911 Female, age 85, right hemisphere 97.2
Dentate gyrus
nTPM: 98.7
1927 Female, age 91, both hemispheres 110.9
2531 Female, age 67, both hemispheres 101.5
2010 Male, age 76, both hemispheres 98.4
2530 Female, age 94, left hemisphere 97.0
2528 Male, age 74, both hemispheres 94.5
2246 Female, age 85, both hemispheres 89.8
Entorhinal gyrus
nTPM: 103.7
1787 Male, age 76, left hemisphere 108.7
2764 Male, age 80, right hemisphere 107.8
2613 Female, age 94, left hemisphere 105.2
1938 Female, age 85, left hemisphere 103.9
2117 Female, age 91, right hemisphere 103.5
2686 Male, age 75, right hemisphere 93.3
Hippocampus, CA1
nTPM: 117.4
2749 Male, age 80, left hemisphere 174.5
2527 Male, age 74, both hemispheres 113.5
2082 Female, age 91, right hemisphere 101.2
1873 Female, age 85, both hemispheres 99.5
2045 Male, age 76, both hemispheres 98.5
Hippocampus, CA2
nTPM: 104.7
1963 Male, age 80, left hemisphere 114.0
1892 Male, age 76, both hemispheres 113.4
2113 Female, age 91, right hemisphere 110.8
1940 Female, age 85, left hemisphere 100.6
2437 Female, age 94, left hemisphere 96.2
2249 Male, age 74, both hemispheres 93.3
Hippocampus, CA3
nTPM: 114.1
2137 Male, age 80, left hemisphere 157.7
2861 Female, age 67, both hemispheres 130.2
2620 Female, age 94, left hemisphere 113.7
1867 Male, age 76, both hemispheres 107.4
1891 Female, age 85, both hemispheres 91.8
2436 Male, age 74, both hemispheres 83.9
Parahippocampal cortex
nTPM: 99.6
1850 Male, age 80, both hemispheres 110.7
2245 Female, age 91, both hemispheres 106.3
2692 Male, age 74, both hemispheres 103.1
2622 Female, age 67, right hemisphere 100.4
1933 Female, age 85, both hemispheres 99.5
1990 Female, age 91, right hemisphere 99.4
2018 Male, age 76, both hemispheres 98.1
2250 Female, age 67, right hemisphere 95.1
2532 Female, age 72, left hemisphere 92.4
2693 Female, age 94, both hemispheres 91.4
Perirhinal gyrus
nTPM: 107.5
1847 Female, age 91, left hemisphere 121.9
1794 Male, age 80, right hemisphere 116.4
2521 Female, age 94, right hemisphere 107.6
1841 Female, age 85, right hemisphere 100.2
2848 Male, age 76, right hemisphere 91.2
Subiculum
nTPM: 101.1
1901 Male, age 80, both hemispheres 119.0
2729 Female, age 91, right hemisphere 107.8
2619 Male, age 74, both hemispheres 97.5
2042 Male, age 76, both hemispheres 94.9
1977 Female, age 85, both hemispheres 94.5
2438 Female, age 94, left hemisphere 92.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 114.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.7
Samples: 197

Max nTPM: 275.7
Min nTPM: 25.6
Std nTPM: 42.9
Median nTPM: 110.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 275.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 231.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 229.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 217.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 216.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 209.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 205.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 201.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 197.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 196.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 190.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.3
FF:10153-102I9 76 years, female 85.6
FF:10169-103B7 60 years, female 69.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 142.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.4
Samples: 4

Max nTPM: 144.2
Min nTPM: 120.7
Sample A Male 137.6
Sample B Male 144.2
Sample C Female 120.7
Sample D Female 122.9
Hippocampal formation
nTPM: 142.1
Samples: 4

Max nTPM: 150.9
Min nTPM: 125.6
Sample A Male 147.1
Sample B Male 150.9
Sample C Female 144.8
Sample D Female 125.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
70523790 Antisense, RP_050303_01_H06, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.