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ATL3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.8 nTPM
HPA:9.8 nTPM
GTEx:7.6 nTPM
FANTOM5:40.4 Scaled Tags Per Million
Pig:16.0 nTPM
Mouse:12.3 nTPM
Allen mouse:15.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.8
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
1855 Male, age 76, left hemisphere 11.2
1898 Male, age 80, left hemisphere 10.4
2529 Female, age 94, left hemisphere 10.4
1911 Female, age 85, right hemisphere 10.2
2148 Female, age 91, left hemisphere 8.9
2621 Female, age 67, right hemisphere 7.8
Dentate gyrus
nTPM: 9.4
2530 Female, age 94, left hemisphere 10.8
2528 Male, age 74, both hemispheres 10.2
2010 Male, age 76, both hemispheres 9.8
2246 Female, age 85, both hemispheres 8.7
2531 Female, age 67, both hemispheres 8.5
1927 Female, age 91, both hemispheres 8.2
Entorhinal gyrus
nTPM: 9.5
2117 Female, age 91, right hemisphere 13.5
1938 Female, age 85, left hemisphere 9.7
2686 Male, age 75, right hemisphere 9.0
1787 Male, age 76, left hemisphere 8.7
2764 Male, age 80, right hemisphere 8.4
2613 Female, age 94, left hemisphere 7.5
Hippocampus, CA1
nTPM: 9.1
2045 Male, age 76, both hemispheres 9.9
1873 Female, age 85, both hemispheres 9.8
2082 Female, age 91, right hemisphere 9.6
2527 Male, age 74, both hemispheres 9.5
2749 Male, age 80, left hemisphere 6.8
Hippocampus, CA2
nTPM: 9.6
1963 Male, age 80, left hemisphere 10.6
2249 Male, age 74, both hemispheres 10.2
1940 Female, age 85, left hemisphere 10.0
2113 Female, age 91, right hemisphere 10.0
2437 Female, age 94, left hemisphere 9.1
1892 Male, age 76, both hemispheres 8.0
Hippocampus, CA3
nTPM: 9.1
1891 Female, age 85, both hemispheres 11.1
2436 Male, age 74, both hemispheres 10.6
1867 Male, age 76, both hemispheres 9.0
2861 Female, age 67, both hemispheres 8.5
2620 Female, age 94, left hemisphere 8.1
2137 Male, age 80, left hemisphere 7.4
Parahippocampal cortex
nTPM: 8.7
2018 Male, age 76, both hemispheres 9.8
2250 Female, age 67, right hemisphere 9.6
2692 Male, age 74, both hemispheres 9.3
1933 Female, age 85, both hemispheres 9.1
1990 Female, age 91, right hemisphere 8.9
1850 Male, age 80, both hemispheres 8.7
2532 Female, age 72, left hemisphere 8.5
2693 Female, age 94, both hemispheres 8.3
2245 Female, age 91, both hemispheres 8.1
2622 Female, age 67, right hemisphere 6.9
Perirhinal gyrus
nTPM: 8.2
2521 Female, age 94, right hemisphere 9.5
1841 Female, age 85, right hemisphere 8.5
1794 Male, age 80, right hemisphere 7.9
1847 Female, age 91, left hemisphere 7.5
2848 Male, age 76, right hemisphere 7.4
Subiculum
nTPM: 9.8
2042 Male, age 76, both hemispheres 12.1
2729 Female, age 91, right hemisphere 11.2
1901 Male, age 80, both hemispheres 10.5
1977 Female, age 85, both hemispheres 9.2
2619 Male, age 74, both hemispheres 8.3
2438 Female, age 94, left hemisphere 7.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.6
Samples: 197

Max nTPM: 16.6
Min nTPM: 3.6
Std nTPM: 2.4
Median nTPM: 7.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 15.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 15.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 13.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 13.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 12.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 12.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 12.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 12.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 12.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 11.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.4
FF:10153-102I9 76 years, female 48.3
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 19.7
Min nTPM: 10.1
Sample A Female 19.7
Sample B Female 14.7
Sample C Male 19.5
Sample D Male 10.1
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 14.7
Min nTPM: 8.9
Sample A Female 11.8
Sample B Female 14.7
Sample C Male 13.1
Sample D Male 8.9
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 15.3
Min nTPM: 13.6
Sample A Female 14.5
Sample B Female 13.6
Sample C Male 14.0
Sample D Male 15.3
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.8
Sample A Female 14.4
Sample B Female 12.8
Sample C Male 16.2
Sample D Male 13.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.3
Sample A Male 11.6
Sample B Male 11.7
Sample C Female 11.3
Sample D Female 13.4
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.5
Sample A Male 11.6
Sample B Male 12.2
Sample C Female 13.9
Sample D Female 11.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.7
583570 Antisense, RP_040831_02_E05, Mouse strain C57BL/6J (56 days, male) 15.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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