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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:161.3 nTPM
HPA:161.3 nTPM
GTEx:115.7 nTPM
FANTOM5:170.9 Scaled Tags Per Million
Pig:120.5 nTPM
Mouse:359.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039903
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 161.3
Sample id Sample description nTPM
Hippocampus
nTPM: 158.9
1898 Male, age 80, left hemisphere 167.0
2529 Female, age 94, left hemisphere 161.0
2621 Female, age 67, right hemisphere 159.3
1855 Male, age 76, left hemisphere 156.6
1911 Female, age 85, right hemisphere 155.7
2148 Female, age 91, left hemisphere 154.2
Dentate gyrus
nTPM: 156.0
2530 Female, age 94, left hemisphere 161.6
2010 Male, age 76, both hemispheres 158.9
1927 Female, age 91, both hemispheres 157.2
2246 Female, age 85, both hemispheres 153.9
2528 Male, age 74, both hemispheres 152.3
2531 Female, age 67, both hemispheres 151.6
Entorhinal gyrus
nTPM: 155.8
1938 Female, age 85, left hemisphere 159.1
1787 Male, age 76, left hemisphere 156.6
2764 Male, age 80, right hemisphere 155.8
2613 Female, age 94, left hemisphere 155.6
2686 Male, age 75, right hemisphere 154.6
2117 Female, age 91, right hemisphere 153.4
Hippocampus, CA1
nTPM: 158.4
2749 Male, age 80, left hemisphere 165.3
2527 Male, age 74, both hemispheres 160.0
1873 Female, age 85, both hemispheres 158.1
2045 Male, age 76, both hemispheres 156.3
2082 Female, age 91, right hemisphere 152.4
Hippocampus, CA2
nTPM: 158.9
1892 Male, age 76, both hemispheres 165.4
2249 Male, age 74, both hemispheres 161.8
1963 Male, age 80, left hemisphere 159.1
2437 Female, age 94, left hemisphere 157.5
1940 Female, age 85, left hemisphere 155.2
2113 Female, age 91, right hemisphere 154.5
Hippocampus, CA3
nTPM: 156.1
1867 Male, age 76, both hemispheres 161.5
2137 Male, age 80, left hemisphere 158.5
2436 Male, age 74, both hemispheres 156.2
1891 Female, age 85, both hemispheres 156.1
2861 Female, age 67, both hemispheres 152.5
2620 Female, age 94, left hemisphere 151.7
Parahippocampal cortex
nTPM: 157.8
1850 Male, age 80, both hemispheres 163.3
2250 Female, age 67, right hemisphere 163.3
1990 Female, age 91, right hemisphere 160.2
2018 Male, age 76, both hemispheres 159.7
2532 Female, age 72, left hemisphere 158.5
1933 Female, age 85, both hemispheres 158.4
2693 Female, age 94, both hemispheres 155.9
2245 Female, age 91, both hemispheres 154.3
2692 Male, age 74, both hemispheres 152.9
2622 Female, age 67, right hemisphere 151.1
Perirhinal gyrus
nTPM: 161.3
1847 Female, age 91, left hemisphere 167.1
1841 Female, age 85, right hemisphere 163.6
1794 Male, age 80, right hemisphere 163.0
2521 Female, age 94, right hemisphere 157.0
2848 Male, age 76, right hemisphere 156.0
Subiculum
nTPM: 156.6
1901 Male, age 80, both hemispheres 160.0
1977 Female, age 85, both hemispheres 159.9
2619 Male, age 74, both hemispheres 159.5
2438 Female, age 94, left hemisphere 154.7
2042 Male, age 76, both hemispheres 154.2
2729 Female, age 91, right hemisphere 151.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.7
Samples: 197

Max nTPM: 341.4
Min nTPM: 65.6
Std nTPM: 31.3
Median nTPM: 111.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 341.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 223.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 215.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 197.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 181.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 176.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 174.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 174.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 173.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 168.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 166.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 170.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 170.9
FF:10169-103B7 60 years, female 174.7
FF:10153-102I9 76 years, female 167.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 120.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 119.7
Samples: 4

Max nTPM: 156.6
Min nTPM: 72.0
Sample A Female 156.6
Sample B Female 110.1
Sample C Male 139.9
Sample D Male 72.0
Entorhinal cortex
nTPM: 120.5
Samples: 4

Max nTPM: 138.3
Min nTPM: 96.6
Sample A Female 131.2
Sample B Female 138.3
Sample C Male 115.9
Sample D Male 96.6
Subiculum
nTPM: 100.7
Samples: 4

Max nTPM: 137.6
Min nTPM: 81.9
Sample A Female 137.6
Sample B Female 96.5
Sample C Male 81.9
Sample D Male 86.6
Ventral hippocampus
nTPM: 111.6
Samples: 4

Max nTPM: 124.8
Min nTPM: 84.9
Sample A Female 123.0
Sample B Female 84.9
Sample C Male 124.8
Sample D Male 113.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 359.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 314.5
Samples: 4

Max nTPM: 348.5
Min nTPM: 291.8
Sample A Male 291.8
Sample B Male 304.7
Sample C Female 348.5
Sample D Female 313.0
Hippocampal formation
nTPM: 359.5
Samples: 4

Max nTPM: 409.4
Min nTPM: 334.6
Sample A Male 409.4
Sample B Male 345.0
Sample C Female 334.6
Sample D Female 348.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.