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SMIM10
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.7 nTPM
HPA:9.7 nTPM
GTEx:10.0 nTPM
FANTOM5:13.0 Scaled Tags Per Million

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.7
Sample id Sample description nTPM
Hippocampus
nTPM: 9.7
2529 Female, age 94, left hemisphere 10.5
1898 Male, age 80, left hemisphere 9.8
2621 Female, age 67, right hemisphere 9.7
1855 Male, age 76, left hemisphere 9.5
1911 Female, age 85, right hemisphere 9.4
2148 Female, age 91, left hemisphere 9.4
Dentate gyrus
nTPM: 9.3
2530 Female, age 94, left hemisphere 10.3
2010 Male, age 76, both hemispheres 9.8
2531 Female, age 67, both hemispheres 9.1
2528 Male, age 74, both hemispheres 9.0
2246 Female, age 85, both hemispheres 8.8
1927 Female, age 91, both hemispheres 8.7
Entorhinal gyrus
nTPM: 8.7
2117 Female, age 91, right hemisphere 9.2
2686 Male, age 75, right hemisphere 9.1
1938 Female, age 85, left hemisphere 8.6
2764 Male, age 80, right hemisphere 8.6
1787 Male, age 76, left hemisphere 8.5
2613 Female, age 94, left hemisphere 8.0
Hippocampus, CA1
nTPM: 9.2
2527 Male, age 74, both hemispheres 9.8
1873 Female, age 85, both hemispheres 9.5
2045 Male, age 76, both hemispheres 9.1
2082 Female, age 91, right hemisphere 9.0
2749 Male, age 80, left hemisphere 8.5
Hippocampus, CA2
nTPM: 9.3
2249 Male, age 74, both hemispheres 10.3
2437 Female, age 94, left hemisphere 9.4
2113 Female, age 91, right hemisphere 9.3
1963 Male, age 80, left hemisphere 9.2
1940 Female, age 85, left hemisphere 9.1
1892 Male, age 76, both hemispheres 8.6
Hippocampus, CA3
nTPM: 9.1
2861 Female, age 67, both hemispheres 10.0
2436 Male, age 74, both hemispheres 9.4
1867 Male, age 76, both hemispheres 9.1
1891 Female, age 85, both hemispheres 9.0
2137 Male, age 80, left hemisphere 8.7
2620 Female, age 94, left hemisphere 8.7
Parahippocampal cortex
nTPM: 9.0
2245 Female, age 91, both hemispheres 9.4
2250 Female, age 67, right hemisphere 9.4
2018 Male, age 76, both hemispheres 9.3
2692 Male, age 74, both hemispheres 9.0
1850 Male, age 80, both hemispheres 8.9
1933 Female, age 85, both hemispheres 8.9
2622 Female, age 67, right hemisphere 8.9
1990 Female, age 91, right hemisphere 8.8
2532 Female, age 72, left hemisphere 8.6
2693 Female, age 94, both hemispheres 8.6
Perirhinal gyrus
nTPM: 8.7
1794 Male, age 80, right hemisphere 9.0
1841 Female, age 85, right hemisphere 8.9
1847 Female, age 91, left hemisphere 8.6
2848 Male, age 76, right hemisphere 8.6
2521 Female, age 94, right hemisphere 8.4
Subiculum
nTPM: 9.2
2438 Female, age 94, left hemisphere 9.6
2729 Female, age 91, right hemisphere 9.5
2042 Male, age 76, both hemispheres 9.4
1901 Male, age 80, both hemispheres 9.1
1977 Female, age 85, both hemispheres 8.7
2619 Male, age 74, both hemispheres 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.0
Samples: 197

Max nTPM: 20.5
Min nTPM: 3.2
Std nTPM: 3.5
Median nTPM: 9.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 20.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 19.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 19.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 18.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 17.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 17.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 17.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 17.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 17.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 17.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.0
FF:10169-103B7 60 years, female 13.6
FF:10153-102I9 76 years, female 12.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.