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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:64.4 nTPM
HPA:64.4 nTPM
GTEx:63.7 nTPM
FANTOM5:62.9 Scaled Tags Per Million
Pig:163.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042123Antibody HPA048064Antibody CAB012180
Glial cells LowNot detectedLow
Neuronal cells MediumNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.4
Sample id Sample description nTPM
Hippocampus
nTPM: 53.2
1898 Male, age 80, left hemisphere 61.5
2529 Female, age 94, left hemisphere 54.4
2148 Female, age 91, left hemisphere 54.0
1855 Male, age 76, left hemisphere 51.8
2621 Female, age 67, right hemisphere 51.6
1911 Female, age 85, right hemisphere 45.9
Dentate gyrus
nTPM: 55.6
1927 Female, age 91, both hemispheres 63.8
2010 Male, age 76, both hemispheres 57.7
2246 Female, age 85, both hemispheres 56.6
2530 Female, age 94, left hemisphere 53.7
2531 Female, age 67, both hemispheres 51.7
2528 Male, age 74, both hemispheres 50.2
Entorhinal gyrus
nTPM: 53.5
2764 Male, age 80, right hemisphere 57.8
2613 Female, age 94, left hemisphere 55.5
1938 Female, age 85, left hemisphere 54.7
1787 Male, age 76, left hemisphere 54.6
2686 Male, age 75, right hemisphere 50.1
2117 Female, age 91, right hemisphere 48.0
Hippocampus, CA1
nTPM: 57.8
2749 Male, age 80, left hemisphere 66.5
2045 Male, age 76, both hemispheres 61.2
1873 Female, age 85, both hemispheres 60.0
2527 Male, age 74, both hemispheres 53.5
2082 Female, age 91, right hemisphere 47.9
Hippocampus, CA2
nTPM: 54.1
1892 Male, age 76, both hemispheres 63.2
1963 Male, age 80, left hemisphere 62.2
2249 Male, age 74, both hemispheres 51.6
1940 Female, age 85, left hemisphere 51.0
2437 Female, age 94, left hemisphere 49.1
2113 Female, age 91, right hemisphere 47.2
Hippocampus, CA3
nTPM: 56.0
2137 Male, age 80, left hemisphere 61.9
2620 Female, age 94, left hemisphere 61.7
1867 Male, age 76, both hemispheres 56.7
2436 Male, age 74, both hemispheres 53.1
2861 Female, age 67, both hemispheres 52.4
1891 Female, age 85, both hemispheres 50.0
Parahippocampal cortex
nTPM: 54.2
1850 Male, age 80, both hemispheres 63.6
2245 Female, age 91, both hemispheres 55.4
1933 Female, age 85, both hemispheres 55.0
2250 Female, age 67, right hemisphere 54.9
2693 Female, age 94, both hemispheres 54.8
2018 Male, age 76, both hemispheres 53.5
1990 Female, age 91, right hemisphere 52.8
2692 Male, age 74, both hemispheres 52.3
2532 Female, age 72, left hemisphere 51.3
2622 Female, age 67, right hemisphere 48.2
Perirhinal gyrus
nTPM: 64.4
1794 Male, age 80, right hemisphere 67.9
1847 Female, age 91, left hemisphere 67.9
2521 Female, age 94, right hemisphere 67.6
1841 Female, age 85, right hemisphere 61.3
2848 Male, age 76, right hemisphere 57.4
Subiculum
nTPM: 50.6
1977 Female, age 85, both hemispheres 54.8
1901 Male, age 80, both hemispheres 51.2
2619 Male, age 74, both hemispheres 51.1
2438 Female, age 94, left hemisphere 49.9
2729 Female, age 91, right hemisphere 48.5
2042 Male, age 76, both hemispheres 47.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.7
Samples: 197

Max nTPM: 171.6
Min nTPM: 12.9
Std nTPM: 26.8
Median nTPM: 58.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 171.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 145.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 139.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 133.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 130.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 121.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 121.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 119.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 119.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 117.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 116.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.9
FF:10153-102I9 76 years, female 70.4
FF:10169-103B7 60 years, female 55.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 163.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 131.3
Samples: 4

Max nTPM: 163.9
Min nTPM: 93.5
Sample A Female 163.9
Sample B Female 132.0
Sample C Male 135.8
Sample D Male 93.5
Entorhinal cortex
nTPM: 163.0
Samples: 4

Max nTPM: 195.0
Min nTPM: 128.4
Sample A Female 139.1
Sample B Female 189.5
Sample C Male 195.0
Sample D Male 128.4
Subiculum
nTPM: 128.2
Samples: 4

Max nTPM: 171.2
Min nTPM: 97.5
Sample A Female 171.2
Sample B Female 130.5
Sample C Male 97.5
Sample D Male 113.6
Ventral hippocampus
nTPM: 121.5
Samples: 4

Max nTPM: 139.2
Min nTPM: 105.7
Sample A Female 118.1
Sample B Female 105.7
Sample C Male 139.2
Sample D Male 123.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.