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FMNL1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.8 nTPM
HPA:20.8 nTPM
GTEx:30.0 nTPM
FANTOM5:45.6 Scaled Tags Per Million
Pig:10.1 nTPM
Mouse:37.6 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008129Antibody HPA028288
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.8
Sample id Sample description nTPM
Hippocampus
nTPM: 20.8
1898 Male, age 80, left hemisphere 26.1
2621 Female, age 67, right hemisphere 25.4
1855 Male, age 76, left hemisphere 21.9
2148 Female, age 91, left hemisphere 21.9
1911 Female, age 85, right hemisphere 15.6
2529 Female, age 94, left hemisphere 13.9
Dentate gyrus
nTPM: 19.4
2530 Female, age 94, left hemisphere 23.5
2531 Female, age 67, both hemispheres 22.9
1927 Female, age 91, both hemispheres 21.5
2010 Male, age 76, both hemispheres 19.3
2246 Female, age 85, both hemispheres 15.0
2528 Male, age 74, both hemispheres 14.0
Entorhinal gyrus
nTPM: 14.3
2613 Female, age 94, left hemisphere 24.3
1787 Male, age 76, left hemisphere 13.3
2117 Female, age 91, right hemisphere 12.9
2764 Male, age 80, right hemisphere 12.7
1938 Female, age 85, left hemisphere 11.5
2686 Male, age 75, right hemisphere 11.0
Hippocampus, CA1
nTPM: 20.1
2749 Male, age 80, left hemisphere 32.5
1873 Female, age 85, both hemispheres 19.6
2045 Male, age 76, both hemispheres 17.9
2527 Male, age 74, both hemispheres 15.8
2082 Female, age 91, right hemisphere 14.4
Hippocampus, CA2
nTPM: 17.3
1963 Male, age 80, left hemisphere 26.2
2437 Female, age 94, left hemisphere 21.9
1892 Male, age 76, both hemispheres 16.5
2113 Female, age 91, right hemisphere 15.1
1940 Female, age 85, left hemisphere 12.3
2249 Male, age 74, both hemispheres 11.6
Hippocampus, CA3
nTPM: 20.7
2861 Female, age 67, both hemispheres 32.6
2137 Male, age 80, left hemisphere 31.7
2620 Female, age 94, left hemisphere 18.5
1867 Male, age 76, both hemispheres 18.2
1891 Female, age 85, both hemispheres 12.6
2436 Male, age 74, both hemispheres 10.6
Parahippocampal cortex
nTPM: 13.9
2245 Female, age 91, both hemispheres 21.2
2250 Female, age 67, right hemisphere 16.9
2693 Female, age 94, both hemispheres 15.0
2622 Female, age 67, right hemisphere 14.6
2018 Male, age 76, both hemispheres 13.7
1990 Female, age 91, right hemisphere 12.7
2532 Female, age 72, left hemisphere 11.9
1850 Male, age 80, both hemispheres 11.1
1933 Female, age 85, both hemispheres 11.0
2692 Male, age 74, both hemispheres 10.6
Perirhinal gyrus
nTPM: 13.0
2521 Female, age 94, right hemisphere 18.6
1847 Female, age 91, left hemisphere 15.2
1794 Male, age 80, right hemisphere 11.8
1841 Female, age 85, right hemisphere 11.1
2848 Male, age 76, right hemisphere 8.5
Subiculum
nTPM: 15.6
1901 Male, age 80, both hemispheres 20.2
2438 Female, age 94, left hemisphere 15.8
2042 Male, age 76, both hemispheres 15.6
2729 Female, age 91, right hemisphere 15.5
2619 Male, age 74, both hemispheres 13.9
1977 Female, age 85, both hemispheres 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 92.1
Min nTPM: 4.4
Std nTPM: 14.3
Median nTPM: 30.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 92.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 71.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 67.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 65.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 61.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 60.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 56.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 56.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 55.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 53.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 53.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.6
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 34.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 12.0
Min nTPM: 7.2
Sample A Female 11.8
Sample B Female 12.0
Sample C Male 7.2
Sample D Male 9.3
Entorhinal cortex
nTPM: 9.1
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.9
Sample A Female 9.3
Sample B Female 7.9
Sample C Male 9.3
Sample D Male 9.7
Subiculum
nTPM: 9.6
Samples: 4

Max nTPM: 14.9
Min nTPM: 6.8
Sample A Female 14.9
Sample B Female 8.5
Sample C Male 8.2
Sample D Male 6.8
Ventral hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 12.0
Min nTPM: 7.1
Sample A Female 8.4
Sample B Female 7.1
Sample C Male 10.0
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.6
Samples: 4

Max nTPM: 42.3
Min nTPM: 34.6
Sample A Male 34.6
Sample B Male 36.3
Sample C Female 37.0
Sample D Female 42.3
Hippocampal formation
nTPM: 35.0
Samples: 4

Max nTPM: 38.4
Min nTPM: 30.3
Sample A Male 33.1
Sample B Male 38.4
Sample C Female 30.3
Sample D Female 38.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
75041433 Antisense, RP_060412_04_B03, Mouse strain C57BL/6J (56 days, male) 12.6
69672509 Antisense, RP_050428_03_H09, Mouse strain C57BL/6J (56 days, male) 10.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.