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USP18
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.9 nTPM
HPA:3.9 nTPM
GTEx:3.6 nTPM
FANTOM5:2.5 Scaled Tags Per Million

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 3.9
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 3.4
2666 Male, age 74, left hemisphere 4.1
1870 Female, age 42, unknown 3.6
2586 Male, age 75, left hemisphere 3.5
2828 Female, age 72, unknown 3.5
1827 Male, age 72, unknown 3.4
1833 Male, age 53, unknown 3.3
1830 Male, age 51, unknown 3.2
2019 Male, age 18, unknown 3.2
2411 Female, age 72, unknown 3.1
2219 Male, age 76, both hemispheres 2.8
Dorsal raphe nucleus
nTPM: 3.9
1828 Male, age 53, unknown 4.5
2298 Female, age 72, unknown 4.0
2016 Female, age 72, unknown 3.8
2047 Male, age 72, unknown 3.7
2750 Male, age 76, both hemispheres 3.5
Inferior colliculus
nTPM: 3.4
1848 Female, age 42, unknown 3.7
2097 Female, age 72, unknown 3.4
2849 Male, age 72, unknown 3.4
1890 Male, age 53, unknown 3.0
Median raphe nucleus
nTPM: 3.6
2220 Male, age 76, midline 3.6
Pedunculopontine tegmental nucleus
nTPM: 3.5
2338 Male, age 61, both hemispheres 4.2
2334 Male, age 80, both hemispheres 3.4
1921 Female, age 85, both hemispheres 3.1
Periaquaductal grey, anterior
nTPM: 3.6
2502 Female, age 75, unknown 3.7
1795 Male, age 51, unknown 3.6
1947 Male, age 18, unknown 3.6
Periaquaductal grey, dorsal
nTPM: 3.8
2850 Male, age 76, both hemispheres 4.6
1831 Male, age 72, unknown 3.6
1840 Male, age 53, unknown 3.5
2464 Female, age 72, unknown 3.4
Periaquaductal grey, lateral
nTPM: 3.9
2140 Male, age 76, both hemispheres 4.3
2272 Male, age 74, both hemispheres 3.9
2053 Male, age 18, unknown 3.5
Pretectal area
nTPM: 3.6
1815 Male, age 53, unknown 4.5
2224 Female, age 72, unknown 3.7
2273 Male, age 74, both hemispheres 3.7
2825 Male, age 18, unknown 3.7
1817 Female, age 42, unknown 3.6
1944 Female, age 72, unknown 3.6
2316 Male, age 76, right hemisphere 3.5
2667 Female, age 75, unknown 3.5
1816 Male, age 51, unknown 3.4
2007 Male, age 72, unknown 3.1
2407 Male, age 75, both hemispheres 3.0
Red nucleus
nTPM: 3.5
2227 Male, age 72, unknown 3.8
1954 Female, age 42, unknown 3.7
1821 Female, age 72, unknown 3.5
2503 Female, age 72, unknown 3.5
2584 Male, age 75, left hemisphere 3.5
2725 Female, age 75, unknown 3.5
2769 Male, age 72, unknown 3.5
1865 Male, age 51, unknown 3.4
1904 Male, age 53, unknown 3.4
2785 Male, age 18, unknown 3.3
2823 Male, age 76, right hemisphere 3.3
2588 Male, age 74, left hemisphere 3.2
Substantia nigra
nTPM: 3.6
2699 Male, age 18, unknown 4.1
2665 Male, age 74, both hemispheres 4.0
2241 Male, age 72, unknown 3.8
1851 Male, age 51, unknown 3.6
1889 Female, age 72, unknown 3.6
1916 Female, age 42, unknown 3.5
2409 Female, age 72, unknown 3.5
2590 Female, age 75, unknown 3.5
2583 Male, age 75, right hemisphere 3.3
1941 Male, age 53, unknown 3.1
Superior colliculus
nTPM: 3.5
1796 Male, age 53, unknown 3.6
1895 Male, age 76, right hemisphere 3.6
1995 Male, age 72, unknown 3.6
2261 Male, age 18, unknown 3.6
1839 Male, age 51, unknown 3.5
1913 Female, age 42, unknown 3.5
2087 Female, age 72, unknown 3.5
2668 Female, age 75, unknown 3.5
2587 Male, age 74, left hemisphere 3.4
2664 Male, age 75, both hemispheres 3.2
Ventral tegmental area
nTPM: 3.6
1942 Male, age 51, unknown 4.1
1915 Female, age 42, unknown 3.8
2218 Male, age 76, both hemispheres 3.7
2021 Male, age 53, unknown 3.5
2410 Female, age 72, unknown 3.5
2223 Female, age 72, unknown 3.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 3.6
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 3.6
Samples: 139

Max nTPM: 8.0
Min nTPM: 0.7
Std nTPM: 1.2
Median nTPM: 3.4
GTEX-17HG3-0011-R2a-SM-7MGVX 30-39 years, female 8.0
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 7.4
GTEX-1IL2U-0011-R2a-SM-ARU6V 60-69 years, male 7.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ 60-69 years, male 7.3
GTEX-11GSP-0011-R2b-SM-9QEGE 60-69 years, female 6.8
GTEX-13OW6-0011-R2a-SM-5L3HG 50-59 years, male 6.1
GTEX-14PN4-0011-R2a-SM-6EU2Y 50-59 years, male 5.8
GTEX-YJ89-0011-R2b-SM-4RGLT 60-69 years, male 5.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK 50-59 years, male 5.5
GTEX-14ASI-0011-R2b-SM-5YY9H 60-69 years, male 5.2
GTEX-NPJ8-0011-R2a-SM-2TC6M 40-49 years, male 5.2
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 2.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 2.5
FF:10158-103A5 76 years, female 2.5

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