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GALNT17
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:55.0 nTPM
HPA:55.0 nTPM
GTEx:46.6 nTPM
FANTOM5:39.7 Scaled Tags Per Million
Pig:72.0 nTPM
Mouse:36.0 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013624
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.0
Sample id Sample description nTPM
Hippocampus
nTPM: 46.7
2148 Female, age 91, left hemisphere 70.2
2621 Female, age 67, right hemisphere 66.9
1898 Male, age 80, left hemisphere 54.0
1855 Male, age 76, left hemisphere 50.3
1911 Female, age 85, right hemisphere 29.2
2529 Female, age 94, left hemisphere 9.3
Dentate gyrus
nTPM: 50.9
1927 Female, age 91, both hemispheres 90.7
2531 Female, age 67, both hemispheres 55.5
2010 Male, age 76, both hemispheres 49.6
2530 Female, age 94, left hemisphere 42.8
2528 Male, age 74, both hemispheres 37.7
2246 Female, age 85, both hemispheres 29.0
Entorhinal gyrus
nTPM: 17.2
2764 Male, age 80, right hemisphere 31.9
1787 Male, age 76, left hemisphere 21.3
2686 Male, age 75, right hemisphere 17.7
2613 Female, age 94, left hemisphere 17.2
1938 Female, age 85, left hemisphere 11.6
2117 Female, age 91, right hemisphere 3.6
Hippocampus, CA1
nTPM: 55.0
2749 Male, age 80, left hemisphere 109.5
1873 Female, age 85, both hemispheres 63.5
2045 Male, age 76, both hemispheres 45.0
2527 Male, age 74, both hemispheres 32.3
2082 Female, age 91, right hemisphere 24.5
Hippocampus, CA2
nTPM: 38.0
1963 Male, age 80, left hemisphere 82.6
1892 Male, age 76, both hemispheres 55.2
2249 Male, age 74, both hemispheres 32.2
2113 Female, age 91, right hemisphere 22.9
2437 Female, age 94, left hemisphere 17.4
1940 Female, age 85, left hemisphere 17.3
Hippocampus, CA3
nTPM: 51.2
2137 Male, age 80, left hemisphere 87.6
2861 Female, age 67, both hemispheres 79.1
2620 Female, age 94, left hemisphere 58.2
2436 Male, age 74, both hemispheres 38.8
1867 Male, age 76, both hemispheres 30.2
1891 Female, age 85, both hemispheres 13.1
Parahippocampal cortex
nTPM: 24.3
2245 Female, age 91, both hemispheres 45.8
2693 Female, age 94, both hemispheres 29.8
1933 Female, age 85, both hemispheres 29.3
2622 Female, age 67, right hemisphere 28.8
2250 Female, age 67, right hemisphere 25.6
2018 Male, age 76, both hemispheres 23.6
2532 Female, age 72, left hemisphere 20.4
1990 Female, age 91, right hemisphere 20.3
1850 Male, age 80, both hemispheres 18.5
2692 Male, age 74, both hemispheres 0.6
Perirhinal gyrus
nTPM: 31.8
2521 Female, age 94, right hemisphere 39.6
1847 Female, age 91, left hemisphere 38.1
1794 Male, age 80, right hemisphere 30.3
2848 Male, age 76, right hemisphere 26.7
1841 Female, age 85, right hemisphere 24.2
Subiculum
nTPM: 17.6
2729 Female, age 91, right hemisphere 27.5
1901 Male, age 80, both hemispheres 26.5
1977 Female, age 85, both hemispheres 24.5
2042 Male, age 76, both hemispheres 17.2
2619 Male, age 74, both hemispheres 9.6
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.6
Samples: 197

Max nTPM: 180.1
Min nTPM: 0.6
Std nTPM: 34.5
Median nTPM: 40.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 180.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 176.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 162.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 134.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 127.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 125.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 124.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 122.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 118.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 118.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 116.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.7
FF:10169-103B7 60 years, female 61.7
FF:10153-102I9 76 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 72.0
Samples: 4

Max nTPM: 107.8
Min nTPM: 23.8
Sample A Female 107.8
Sample B Female 91.5
Sample C Male 23.8
Sample D Male 64.8
Entorhinal cortex
nTPM: 47.0
Samples: 4

Max nTPM: 51.5
Min nTPM: 41.9
Sample A Female 51.0
Sample B Female 41.9
Sample C Male 51.5
Sample D Male 43.7
Subiculum
nTPM: 23.8
Samples: 4

Max nTPM: 29.7
Min nTPM: 18.6
Sample A Female 29.7
Sample B Female 21.2
Sample C Male 18.6
Sample D Male 25.7
Ventral hippocampus
nTPM: 62.5
Samples: 4

Max nTPM: 80.1
Min nTPM: 32.4
Sample A Female 80.1
Sample B Female 32.4
Sample C Male 64.1
Sample D Male 73.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.7
Sample A Male 14.2
Sample B Male 11.7
Sample C Female 16.3
Sample D Female 16.9
Hippocampal formation
nTPM: 36.0
Samples: 4

Max nTPM: 49.0
Min nTPM: 26.0
Sample A Male 26.0
Sample B Male 39.4
Sample C Female 49.0
Sample D Female 29.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
1935 Antisense, RP_Baylor_253992, Mouse strain C57BL/6J (56 days, male) 10.9
1934 Antisense, RP_Baylor_253992, Mouse strain C57BL/6J (56 days, male) 10.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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